RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 CHST10O43529 356 aa15.13■□□□□ 0.01
CLN6-216ENST00000636876 RGS14O43566 566 aa15.13■□□□□ 0.01
CLN6-216ENST00000636876 DNAJB6O75190 326 aa15.13■□□□□ 0.01
CLN6-216ENST00000636876 EEDO75530 441 aaKnown RBP15.13■□□□□ 0.01
CLN6-216ENST00000636876 ALBP02768 609 aa15.13■□□□□ 0.01
CLN6-216ENST00000636876 OLR1P78380 273 aa15.13■□□□□ 0.01
CLN6-216ENST00000636876 RUNX2Q13950 521 aa15.13■□□□□ 0.01
CLN6-216ENST00000636876 PDCD2Q16342 344 aaPredicted RBP15.13■□□□□ 0.01
CLN6-216ENST00000636876 SYT16Q17RD7 645 aa15.13■□□□□ 0.01
CLN6-216ENST00000636876 XKR7Q5GH72 579 aa15.13■□□□□ 0.01
CLN6-216ENST00000636876 MRPL14Q6P1L8 145 aaKnown RBP15.13■□□□□ 0.01
CLN6-216ENST00000636876 PAGE2Q7Z2X7 111 aa15.13■□□□□ 0.01
CLN6-216ENST00000636876 COMMD6Q7Z4G1 85 aa15.13■□□□□ 0.01
CLN6-216ENST00000636876 CRLF3Q8IUI8 442 aa15.13■□□□□ 0.01
CLN6-216ENST00000636876 C1orf52Q8N6N3 182 aaKnown RBP15.13■□□□□ 0.01
CLN6-216ENST00000636876 KDF1Q8NAX2 398 aaPredicted RBP15.13■□□□□ 0.01
CLN6-216ENST00000636876 CHTF18Q8WVB6 975 aa15.13■□□□□ 0.01
CLN6-216ENST00000636876 KIAA1143Q96AT1 154 aaPredicted RBP15.13■□□□□ 0.01
CLN6-216ENST00000636876 CCT7Q99832 543 aa15.13■□□□□ 0.01
CLN6-216ENST00000636876 YIPF2Q9BWQ6 316 aa15.13■□□□□ 0.01
CLN6-216ENST00000636876 DPH1Q9BZG8 443 aa15.13■□□□□ 0.01
CLN6-216ENST00000636876 FAM117AQ9C073 453 aa15.13■□□□□ 0.01
CLN6-216ENST00000636876 SLC26A1Q9H2B4 701 aa15.13■□□□□ 0.01
CLN6-216ENST00000636876 MKKSQ9NPJ1 570 aaPredicted RBP15.13■□□□□ 0.01
CLN6-216ENST00000636876 PFDN4Q9NQP4 134 aa15.13■□□□□ 0.01
CLN6-216ENST00000636876 ADAM29Q9UKF5 820 aa15.13■□□□□ 0.01
CLN6-216ENST00000636876 FASNP49327 2511 aaKnown RBP15.12■□□□□ 0.01
CLN6-216ENST00000636876 DSPP15924 2871 aaKnown RBP15.12■□□□□ 0.01
CLN6-216ENST00000636876 IGLV3-12A0A075B6K2 115 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 A0A0A6YYD5 115 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 TMEM8BA6NDV4 472 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 NPIPB8E9PQR5 432 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 CNOT3O75175 753 aaKnown RBP15.12■□□□□ 0.01
CLN6-216ENST00000636876 RSL1D1O76021 490 aaKnown RBP15.12■□□□□ 0.01
CLN6-216ENST00000636876 CD63P08962 238 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 RNH1P13489 461 aaKnown RBP15.12■□□□□ 0.01
CLN6-216ENST00000636876 PRPH2P23942 346 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 DLSTP36957 453 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 GUCY1A3Q02108 690 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 BTKQ06187 659 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 ACSM2AQ08AH3 577 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 SPIN4Q56A73 249 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 SPDYAQ5MJ70 313 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 ACSM2BQ68CK6 577 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 Q6ZSR9 355 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 VASH2Q86V25 355 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 NUDT13Q86X67 352 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 CA13Q8N1Q1 262 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 ZCCHC7Q8N3Z6 543 aaKnown RBP15.12■□□□□ 0.01
CLN6-216ENST00000636876 ENDOVQ8N8Q3 282 aaKnown RBP15.12■□□□□ 0.01
CLN6-216ENST00000636876 OR2T11Q8NH01 316 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 OR51Q1Q8NH59 317 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 ZCCHC14Q8WYQ9 949 aaKnown RBP15.12■□□□□ 0.01
CLN6-216ENST00000636876 C19orf60Q96EN9 201 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 APIPQ96GX9 242 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 GPR87Q9BY21 358 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 WDR54Q9H977 334 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 GPN2Q9H9Y4 310 aaPredicted RBP15.12■□□□□ 0.01
CLN6-216ENST00000636876 LYRM4Q9HD34 91 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 ZNF282Q9UDV7 671 aaPredicted RBP15.12■□□□□ 0.01
CLN6-216ENST00000636876 MARCOQ9UEW3 520 aaPredicted RBP15.12■□□□□ 0.01
CLN6-216ENST00000636876 FARSAQ9Y285 508 aaKnown RBP15.12■□□□□ 0.01
CLN6-216ENST00000636876 PCDHGA6Q9Y5G7 932 aa15.12■□□□□ 0.01
CLN6-216ENST00000636876 VSTM2BA6NLU5 285 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 SLCO1B7G3V0H7 640 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 HDAC3O15379 428 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 JUNP05412 331 aaKnown RBP15.11■□□□□ 0.01
CLN6-216ENST00000636876 KLK1P06870 262 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 KITP10721 976 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 LIFP15018 202 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 F8A1P23610 371 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 MDH1P40925 334 aaKnown RBP15.11■□□□□ 0.01
CLN6-216ENST00000636876 EIF2S3P41091 472 aaKnown RBP15.11■□□□□ 0.01
CLN6-216ENST00000636876 XCR1P46094 333 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 HK2P52789 917 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 RPS15P62841 145 aaKnown RBP15.11■□□□□ 0.01
CLN6-216ENST00000636876 OCA2Q04671 838 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 SLAMF1Q13291 335 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 NR6A1Q15406 480 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 NKG7Q16617 165 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 MRM1Q6IN84 353 aaKnown RBP15.11■□□□□ 0.01
CLN6-216ENST00000636876 FAM47EQ6ZV65 393 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 ZC3H7AQ8IWR0 971 aaKnown RBP15.11■□□□□ 0.01
CLN6-216ENST00000636876 SHISA5Q8N114 240 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 PIWIL2Q8TC59 973 aaKnown RBP15.11■□□□□ 0.01
CLN6-216ENST00000636876 STT3BQ8TCJ2 826 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 C11orf24Q96F05 449 aaPredicted RBP15.11■□□□□ 0.01
CLN6-216ENST00000636876 PEX11GQ96HA9 241 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 METTL2AQ96IZ6 378 aaKnown RBP15.11■□□□□ 0.01
CLN6-216ENST00000636876 C3orf30Q96M34 536 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 TGIF2Q9GZN2 237 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 CCDC134Q9H6E4 229 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 LRTM1Q9HBL6 345 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 C14orf105Q9NVL8 296 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 RIC8BQ9NVN3 520 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 WDR70Q9NW82 654 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 C1orf109Q9NX04 203 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 SIRT5Q9NXA8 310 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 KCMF1Q9P0J7 381 aa15.11■□□□□ 0.01
CLN6-216ENST00000636876 VTI1BQ9UEU0 232 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms