RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 ESX1Q8N693 406 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 ZNF781Q8N8C0 355 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 ZNF740Q8NDX6 193 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 NACC2Q96BF6 587 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 MS4A6EQ96DS6 147 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 C11orf24Q96F05 449 aaPredicted RBP6.38□□□□□ -1.39
UPF3B-205ENST00000636792 CHMP6Q96FZ7 201 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 SMIM10Q96HG1 83 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 FCRL1Q96LA6 429 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 PPM1MQ96MI6 270 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 ZNF578Q96N58 590 aaPredicted RBP6.38□□□□□ -1.39
UPF3B-205ENST00000636792 ZNF317Q96PQ6 595 aaPredicted RBP6.38□□□□□ -1.39
UPF3B-205ENST00000636792 OR1F2PQ96R84 312 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 SERINC2Q96SA4 455 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 NRTNQ99748 197 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 EFHD1Q9BUP0 239 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 ACPTQ9BZG2 426 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 SLC7A5P2Q9GIP4 190 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 SLC26A1Q9H2B4 701 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 SPNS1Q9H2V7 528 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 ACTR5Q9H9F9 607 aaPredicted RBP6.38□□□□□ -1.39
UPF3B-205ENST00000636792 COPS7BQ9H9Q2 264 aaPredicted RBP6.38□□□□□ -1.39
UPF3B-205ENST00000636792 LYRM4Q9HD34 91 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 CUTCQ9NTM9 273 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 C1orf109Q9NX04 203 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 DNAJB12Q9NXW2 375 aaKnown RBP6.38□□□□□ -1.39
UPF3B-205ENST00000636792 SLC39A1Q9NY26 324 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 ZDHHC2Q9UIJ5 367 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 PHF11Q9UIL8 331 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 MCM8Q9UJA3 840 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 RUVBL1Q9Y265 456 aaKnown RBP6.38□□□□□ -1.39
UPF3B-205ENST00000636792 MRPS33Q9Y291 106 aaKnown RBP6.38□□□□□ -1.39
UPF3B-205ENST00000636792 MSRB2Q9Y3D2 182 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 SPACA6W5XKT8 324 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 SDK2Q58EX2 2172 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 IGLV3-12A0A075B6K2 115 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 A0A1B0GTL3 188 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 ARHGAP10A1A4S6 786 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 HYKKA2RU49 373 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 A8MU76 341 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 C21orf140B9A014 251 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 STMND1H3BQB6 276 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 PPP6CO00743 305 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 PLPP1O14494 284 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 FFAR3O14843 346 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 PIP5K1BO14986 540 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 LSM1O15116 133 aaKnown RBP6.37□□□□□ -1.39
UPF3B-205ENST00000636792 POLR3GO15318 223 aaPredicted RBP6.37□□□□□ -1.39
UPF3B-205ENST00000636792 GPR42O15529 346 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 ERI3O43414 337 aaKnown RBP6.37□□□□□ -1.39
UPF3B-205ENST00000636792 ITM2AO43736 263 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 LCMT2O60294 686 aaKnown RBP6.37□□□□□ -1.39
UPF3B-205ENST00000636792 PRMT3O60678 531 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 GALR3O60755 368 aaPredicted RBP6.37□□□□□ -1.39
UPF3B-205ENST00000636792 LYPLA1O75608 230 aaPredicted RBP6.37□□□□□ -1.39
UPF3B-205ENST00000636792 MYO1DO94832 1006 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 DLGAP3O95886 979 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 RECKO95980 971 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 PDYNP01213 254 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 ADRB1P08588 477 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 PRPS2P11908 318 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 TSPAN8P19075 237 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 ITGAXP20702 1163 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 AGXTP21549 392 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 HIST1H1TP22492 207 aaPredicted RBP6.37□□□□□ -1.39
UPF3B-205ENST00000636792 JAK1P23458 1154 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 RBMS1P29558 406 aaKnown RBP6.37□□□□□ -1.39
UPF3B-205ENST00000636792 PPP2R1BP30154 601 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 LSP1P33241 339 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 RORAP35398 523 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 SSR2P43308 183 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 ASMTP46597 345 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 FOXA1P55317 472 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 C21orf58P58505 322 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 RPS13P62277 151 aaKnown RBP6.37□□□□□ -1.39
UPF3B-205ENST00000636792 ERVK-8P63133 956 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 YBX1P67809 324 aaKnown RBP6.37□□□□□ -1.39
UPF3B-205ENST00000636792 GABREP78334 506 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 MEF2AQ02078 507 aaPredicted RBP6.37□□□□□ -1.39
UPF3B-205ENST00000636792 GUCY1A3Q02108 690 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 ZNF763Q0D2J5 394 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 ABHD18Q0P651 414 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 HYAL2Q12891 473 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 TARDBPQ13148 414 aaKnown RBP eCLIP6.37□□□□□ -1.39
UPF3B-205ENST00000636792 GSTA3Q16772 222 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 DPY19L1Q2PZI1 675 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 AP5B1Q2VPB7 878 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 CCDC157Q569K6 752 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 C3orf38Q5JPI3 329 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 METTL21CQ5VZV1 264 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 CES4AQ5XG92 561 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 CLEC6AQ6EIG7 209 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 OR4C11Q6IEV9 310 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 ABHD17CQ6PCB6 329 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 ACAD11Q709F0 780 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 RPS27LQ71UM5 84 aaKnown RBP6.37□□□□□ -1.39
UPF3B-205ENST00000636792 DGLUCYQ7Z3D6 616 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 ZFAND4Q86XD8 727 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 DDIASQ8IXT1 998 aa6.37□□□□□ -1.39
UPF3B-205ENST00000636792 SAMD14Q8IZD0 417 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms