RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 ITGA9Q13797 1035 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 RCN2Q14257 317 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 SEMA3AQ14563 771 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 INO80DQ53TQ3 878 aaPredicted RBP6.92□□□□□ -1.3
LINC01108-202ENST00000635227 PIK3CD-AS1Q5SR53 167 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 SEL1L3Q68CR1 1132 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 FBXL22Q6P050 247 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 ZCCHC23Q6ZST2 131 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 ELMOD1Q8N336 334 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 KIF2BQ8N4N8 673 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 TEX9Q8N6V9 391 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 TMEM217Q8N7C4 229 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 GPATCH11Q8N954 259 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 HJURPQ8NCD3 748 aaPredicted RBP6.92□□□□□ -1.3
LINC01108-202ENST00000635227 ZNF461Q8TAF7 563 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 C2CD4CQ8TF44 421 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 PSMG2Q969U7 264 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.92□□□□□ -1.3
LINC01108-202ENST00000635227 CMTM5Q96DZ9 223 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 IGSF21Q96ID5 467 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 GCNAQ96QF7 691 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 MRPL57Q9BQC6 102 aaKnown RBP6.92□□□□□ -1.3
LINC01108-202ENST00000635227 TBC1D10AQ9BXI6 508 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 C1orf21Q9H246 121 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 MFSD1Q9H3U5 465 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 CWH43Q9H720 699 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 DCLRE1BQ9H816 532 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 KCNK13Q9HB14 408 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 POPDC3Q9HBV1 291 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 ZNF304Q9HCX3 659 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 SPAG4Q9NPE6 437 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 TREX1Q9NSU2 369 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 INTS10Q9NVR2 710 aaKnown RBP6.92□□□□□ -1.3
LINC01108-202ENST00000635227 HACD3Q9P035 362 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 TMEM216Q9P0N5 145 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 KLQ9UEF7 1012 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 BCAP29Q9UHQ4 241 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 FBXO5Q9UKT4 447 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 EMCNQ9ULC0 261 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 TMCO1Q9UM00 188 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 ZNF510Q9Y2H8 683 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 ASB3Q9Y575 518 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 HS3ST3B1Q9Y662 390 aa6.92□□□□□ -1.3
LINC01108-202ENST00000635227 CCDC189A1A4V9 331 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 C2orf81A6NN90 581 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 A6NNC1 897 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 PRRG1O14668 218 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 HDAC3O15379 428 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 KDELR3O43731 214 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 DIAPH2O60879 1101 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 SMIM24O75264 130 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 LUC7L3O95232 432 aaKnown RBP6.91□□□□□ -1.3
LINC01108-202ENST00000635227 ATF6P18850 670 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 AOC1P19801 751 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 SAT1P21673 171 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 OR1D2P34982 312 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 PPARGP37231 505 aaPredicted RBP6.91□□□□□ -1.3
LINC01108-202ENST00000635227 LEPRP48357 1165 aaKnown RBP6.91□□□□□ -1.3
LINC01108-202ENST00000635227 ARCN1P48444 511 aaKnown RBP6.91□□□□□ -1.3
LINC01108-202ENST00000635227 DNAJB13P59910 316 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 IRX1P78414 480 aaPredicted RBP6.91□□□□□ -1.3
LINC01108-202ENST00000635227 SLC10A7Q0GE19 358 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 MSLNQ13421 630 aaPredicted RBP6.91□□□□□ -1.3
LINC01108-202ENST00000635227 OLIG2Q13516 323 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 MAPRE2Q15555 327 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 CCDC6Q16204 474 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 TRMT5Q32P41 509 aaKnown RBP6.91□□□□□ -1.3
LINC01108-202ENST00000635227 ALFQ53S48 1182 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 ASPHD1Q5U4P2 390 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 AFTPHQ6ULP2 937 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 PRSS55Q6UWB4 352 aaPredicted RBP6.91□□□□□ -1.3
LINC01108-202ENST00000635227 SLC25A41Q8N5S1 370 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 TDRD5Q8NAT2 981 aaKnown RBP6.91□□□□□ -1.3
LINC01108-202ENST00000635227 BRSK1Q8TDC3 778 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 CNDP1Q96KN2 507 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 PSKH2Q96QS6 385 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 SERPINI1Q99574 410 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 SEMA3CQ99985 751 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 MGME1Q9BQP7 344 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 CCDC28BQ9BUN5 200 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 NMUR2Q9GZQ4 415 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 DRC3Q9H069 523 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 RNPEPL1Q9HAU8 725 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 Q9N2J8 555 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 PFDN4Q9NQP4 134 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 IL1RAPL1Q9NZN1 696 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 MARCOQ9UEW3 520 aaPredicted RBP6.91□□□□□ -1.3
LINC01108-202ENST00000635227 MUTYHQ9UIF7 546 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 ANGPTL2Q9UKU9 493 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 RUVBL2Q9Y230 463 aaKnown RBP6.91□□□□□ -1.3
LINC01108-202ENST00000635227 YIPF1Q9Y548 306 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 DOPEY1Q5JWR5 2465 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 SCN8AQ9UQD0 1980 aa6.91□□□□□ -1.3
LINC01108-202ENST00000635227 LOC285095A0A1B0GVY8 99 aa6.9□□□□□ -1.3
LINC01108-202ENST00000635227 STX16-NPEPL1H3BU86 382 aa6.9□□□□□ -1.3
LINC01108-202ENST00000635227 J3KR12 359 aa6.9□□□□□ -1.3
LINC01108-202ENST00000635227 STX16O14662 325 aa6.9□□□□□ -1.3
LINC01108-202ENST00000635227 ATG13O75143 517 aa6.9□□□□□ -1.3
LINC01108-202ENST00000635227 PENKP01210 267 aaPredicted RBP6.9□□□□□ -1.3
LINC01108-202ENST00000635227 PYGLP06737 847 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms