RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 GAREM1Q9H706 876 aa9.45□□□□□ -0.9
SOX2-OT-244ENST00000627738 RMND5AQ9H871 391 aa9.45□□□□□ -0.9
SOX2-OT-244ENST00000627738 CAPN10Q9HC96 672 aa9.45□□□□□ -0.9
SOX2-OT-244ENST00000627738 SPAG4Q9NPE6 437 aa9.45□□□□□ -0.9
SOX2-OT-244ENST00000627738 NLGN3Q9NZ94 848 aa9.45□□□□□ -0.9
SOX2-OT-244ENST00000627738 TMEM181Q9P2C4 612 aa9.45□□□□□ -0.9
SOX2-OT-244ENST00000627738 ATP6V1HQ9UI12 483 aa9.45□□□□□ -0.9
SOX2-OT-244ENST00000627738 ADAM29Q9UKF5 820 aa9.45□□□□□ -0.9
SOX2-OT-244ENST00000627738 SLC6A14Q9UN76 642 aa9.45□□□□□ -0.9
SOX2-OT-244ENST00000627738 MAPRE3Q9UPY8 281 aa9.45□□□□□ -0.9
SOX2-OT-244ENST00000627738 EXO1Q9UQ84 846 aaKnown RBP9.45□□□□□ -0.9
SOX2-OT-244ENST00000627738 BTBD3Q9Y2F9 522 aa9.45□□□□□ -0.9
SOX2-OT-244ENST00000627738 MUC3AQ02505 3323 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 LOC105369274A0A096LPK9 316 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 A0A0A6YYD5 115 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 LOC102723532A0A0G2JNH3 316 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 SLC9B1P1A6NJY1 282 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 H0YGG7 62 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 TRIM38O00635 465 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 ATXN7O15265 892 aaPredicted RBP9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 P2RX6O15547 441 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 NUDT21O43809 227 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 TMPRSS11DO60235 418 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 SH3BP5O60239 455 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 MGRN1O60291 552 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 NPPAP01160 153 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 IL3P08700 152 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 FURINP09958 794 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 SLC35G6P0C7Q6 338 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 ALPPL2P10696 532 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 GLB1P16278 677 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 ME2P23368 584 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 SLC6A2P23975 617 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 SSR2P43308 183 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 MAPK12P53778 367 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 GFERP55789 205 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 WNT3P56703 355 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 OR1D5P58170 312 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 RAB8AP61006 207 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 ARF3P61204 181 aaPredicted RBP9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 STXBP1P61764 594 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 ZNF385BQ569K4 471 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 TRIM61Q5EBN2 209 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 SAMD4BQ5PRF9 694 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 C1orf146Q5VVC0 180 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 FRMPD2BQ6IN97 320 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 NANOGP8Q6NSW7 305 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 TRIM40Q6P9F5 258 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 DNAJC14Q6Y2X3 702 aaPredicted RBP9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 ZNF793Q6ZN11 406 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 FAM92BQ6ZTR7 304 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 MSANTD1Q6ZTZ1 278 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 IKBIPQ70UQ0 350 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 RNF44Q7L0R7 432 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 CAMKMTQ7Z624 323 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 RABEPKQ7Z6M1 372 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 ANKRD46Q86W74 232 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 SLC15A3Q8IY34 581 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 OR4N4Q8N0Y3 316 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 C19orf47Q8N9M1 422 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 KCT2Q8NC54 265 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 CAMKVQ8NCB2 501 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 SRFBP1Q8NEF9 429 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 OR2L5Q8NG80 312 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 OR8J2Q8NGG1 315 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 NCSTNQ92542 709 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 TMEM125Q96AQ2 219 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 AHCYL2Q96HN2 611 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 ITCHQ96J02 903 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 PRPF18Q99633 342 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 CGREF1Q99674 301 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 MAP3K3Q99759 626 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 INPP5KQ9BT40 448 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 TBCDQ9BTW9 1192 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 DUSP23Q9BVJ7 150 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 RBCK1Q9BYM8 510 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 TRIM8Q9BZR9 551 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 KCNH6Q9H252 994 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 DDX31Q9H8H2 851 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 NANOGQ9H9S0 305 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 SERHLQ9NQF3 203 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 PRDM7Q9NQW5 492 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 FAM120CQ9NX05 1096 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 CMTM6Q9NX76 183 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 SH3BP4Q9P0V3 963 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 ABCD2Q9UBJ2 740 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 POMPQ9Y244 141 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 MAN2B2Q9Y2E5 1009 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 PCDHA9Q9Y5H5 950 aa9.44□□□□□ -0.9
SOX2-OT-244ENST00000627738 MDC1Q14676 2089 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 A0A096LPI6 279 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 DCDC2BA2VCK2 349 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 CDC14CA4D256 554 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 FAM86C2PA6NEL3 165 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 PRORSD1PA6NEY8 169 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 NME4O00746 187 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 KHNYNO15037 678 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 YKT6O15498 198 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 KIF1CO43896 1103 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 DFNA5O60443 496 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms