RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 COL26A1Q96A83 441 aa8.07□□□□□ -1.12
SGMS1-211ENST00000626236 MAELQ96JY0 434 aaKnown RBP8.07□□□□□ -1.12
SGMS1-211ENST00000626236 PPP3R2Q96LZ3 170 aa8.07□□□□□ -1.12
SGMS1-211ENST00000626236 SLC46A1Q96NT5 459 aa8.07□□□□□ -1.12
SGMS1-211ENST00000626236 QRFPRQ96P65 431 aa8.07□□□□□ -1.12
SGMS1-211ENST00000626236 SERINC2Q96SA4 455 aa8.07□□□□□ -1.12
SGMS1-211ENST00000626236 EBF4Q9BQW3 602 aa8.07□□□□□ -1.12
SGMS1-211ENST00000626236 SIKE1Q9BRV8 207 aa8.07□□□□□ -1.12
SGMS1-211ENST00000626236 C1orf50Q9BV19 199 aa8.07□□□□□ -1.12
SGMS1-211ENST00000626236 YIPF2Q9BWQ6 316 aa8.07□□□□□ -1.12
SGMS1-211ENST00000626236 ZNF717Q9BY31 904 aaPredicted RBP8.07□□□□□ -1.12
SGMS1-211ENST00000626236 ROGDIQ9GZN7 287 aa8.07□□□□□ -1.12
SGMS1-211ENST00000626236 NRSN2Q9GZP1 204 aa8.07□□□□□ -1.12
SGMS1-211ENST00000626236 RABEP2Q9H5N1 569 aa8.07□□□□□ -1.12
SGMS1-211ENST00000626236 ZNF304Q9HCX3 659 aa8.07□□□□□ -1.12
SGMS1-211ENST00000626236 LHX9Q9NQ69 397 aa8.07□□□□□ -1.12
SGMS1-211ENST00000626236 PRDM7Q9NQW5 492 aa8.07□□□□□ -1.12
SGMS1-211ENST00000626236 HCN3Q9P1Z3 774 aa8.07□□□□□ -1.12
SGMS1-211ENST00000626236 CDC14AQ9UNH5 594 aa8.07□□□□□ -1.12
SGMS1-211ENST00000626236 POLR3HQ9Y535 204 aaPredicted RBP8.07□□□□□ -1.12
SGMS1-211ENST00000626236 MAU2Q9Y6X3 613 aa8.07□□□□□ -1.12
SGMS1-211ENST00000626236 CNOT1A5YKK6 2376 aaKnown RBP8.07□□□□□ -1.12
SGMS1-211ENST00000626236 SDK2Q58EX2 2172 aa8.07□□□□□ -1.12
SGMS1-211ENST00000626236 A0A0A6YYD5 115 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 GNG14A0A1W2PPG7 69 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 NPIPB8E9PQR5 432 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 H0YIG0 161 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 MEN1O00255 615 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 NVLO15381 856 aaKnown RBP8.06□□□□□ -1.12
SGMS1-211ENST00000626236 B3GALT2O43825 422 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 BRINP1O60477 761 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 KLK3P07288 261 aaPredicted RBP8.06□□□□□ -1.12
SGMS1-211ENST00000626236 LBPP18428 481 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 ITGAXP20702 1163 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 AGXTP21549 392 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 FBLP22087 321 aaKnown RBP8.06□□□□□ -1.12
SGMS1-211ENST00000626236 ATP5A1P25705 553 aaKnown RBP8.06□□□□□ -1.12
SGMS1-211ENST00000626236 TPP2P29144 1249 aaPredicted RBP8.06□□□□□ -1.12
SGMS1-211ENST00000626236 TIA1P31483 386 aaKnown RBP eCLIP8.06□□□□□ -1.12
SGMS1-211ENST00000626236 SLC5A2P31639 672 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 RORAP35398 523 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 ARFIP2P53365 341 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 RAE1P78406 368 aaKnown RBP8.06□□□□□ -1.12
SGMS1-211ENST00000626236 MAT1AQ00266 395 aaKnown RBP8.06□□□□□ -1.12
SGMS1-211ENST00000626236 ABHD18Q0P651 414 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 MAD2L1Q13257 205 aaPredicted RBP8.06□□□□□ -1.12
SGMS1-211ENST00000626236 SLAMF1Q13291 335 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 KIAA0040Q15053 153 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 SYT16Q17RD7 645 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 LSM12Q3MHD2 195 aaKnown RBP8.06□□□□□ -1.12
SGMS1-211ENST00000626236 RFTN2Q52LD8 501 aaPredicted RBP8.06□□□□□ -1.12
SGMS1-211ENST00000626236 C6orf136Q5SQH8 315 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 ARHGAP40Q5TG30 622 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 NIPAL1Q6NVV3 410 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 NOXRED1Q6NXP6 359 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 PRMT9Q6P2P2 845 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 C6orf15Q6UXA7 325 aaPredicted RBP8.06□□□□□ -1.12
SGMS1-211ENST00000626236 LARP4Q71RC2 724 aaKnown RBP eCLIP8.06□□□□□ -1.12
SGMS1-211ENST00000626236 SPATA21Q7Z572 469 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 DSELQ8IZU8 1212 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 CDC26Q8NHZ8 85 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 PROKR1Q8TCW9 393 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 ACTRT2Q8TDY3 377 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 MR1Q95460 341 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 NXPE2Q96DL1 559 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 MVB12AQ96EY5 273 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 METTL2AQ96IZ6 378 aaKnown RBP8.06□□□□□ -1.12
SGMS1-211ENST00000626236 RILPQ96NA2 401 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 GBP5Q96PP8 586 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 OR52B2Q96RD2 323 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 ELAC2Q9BQ52 826 aaKnown RBP8.06□□□□□ -1.12
SGMS1-211ENST00000626236 TMEM120AQ9BXJ8 343 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 B3GNT4Q9C0J1 378 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 EPN3Q9H201 632 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 DDX31Q9H8H2 851 aaKnown RBP8.06□□□□□ -1.12
SGMS1-211ENST00000626236 KCNK13Q9HB14 408 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 TCF7L2Q9NQB0 619 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 KLHL14Q9P2G3 628 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 MCM8Q9UJA3 840 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 ADAM29Q9UKF5 820 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 FBXW2Q9UKT8 454 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 WASF3Q9UPY6 502 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 TMED5Q9Y3A6 229 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 NEUROG3Q9Y4Z2 214 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 TMEM184BQ9Y519 407 aaPredicted RBP8.06□□□□□ -1.12
SGMS1-211ENST00000626236 SCN2AQ99250 2005 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 PIEZO1Q92508 2521 aa8.06□□□□□ -1.12
SGMS1-211ENST00000626236 AKAP13Q12802 2813 aa8.05□□□□□ -1.12
SGMS1-211ENST00000626236 SPTBN4Q9H254 2564 aa8.05□□□□□ -1.12
SGMS1-211ENST00000626236 TRABD2BA6NFA1 517 aa8.05□□□□□ -1.12
SGMS1-211ENST00000626236 CDRT15L2A8MXV6 281 aa8.05□□□□□ -1.12
SGMS1-211ENST00000626236 E9PBE3 544 aa8.05□□□□□ -1.12
SGMS1-211ENST00000626236 STMND1H3BQB6 276 aa8.05□□□□□ -1.12
SGMS1-211ENST00000626236 CHST10O43529 356 aa8.05□□□□□ -1.12
SGMS1-211ENST00000626236 TMPRSS11DO60235 418 aa8.05□□□□□ -1.12
SGMS1-211ENST00000626236 KLHL41O60662 606 aa8.05□□□□□ -1.12
SGMS1-211ENST00000626236 DNAJB6O75190 326 aa8.05□□□□□ -1.12
SGMS1-211ENST00000626236 SCELO95171 688 aa8.05□□□□□ -1.12
SGMS1-211ENST00000626236 DLGAP3O95886 979 aa8.05□□□□□ -1.12
SGMS1-211ENST00000626236 ADRB1P08588 477 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms