RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 TPST2O60704 377 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 SYNGR4O95473 234 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 CSF2P04141 144 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 CERS1P27544 350 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 GABRA3P34903 492 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 HOXD12P35452 270 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 PSME3P61289 254 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 ERVK-8P63133 956 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 ELOA3BQ3SY89 546 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 FAM180BQ6P0A1 224 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 CYP4Z2PQ8N1L4 340 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 ELOA3Q8NG57 546 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 TBC1D20Q96BZ9 403 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 FBXL8Q96CD0 374 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 UCKL1Q9NWZ5 548 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 C5AR2Q9P296 337 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 KIF13BQ9NQT8 1826 aa8.69□□□□□ -1.02
HDAC9-229ENST00000622668 C17orf105B2RV13 164 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 HNRNPRO43390 633 aaKnown RBP8.68□□□□□ -1.02
HDAC9-229ENST00000622668 HRO43593 1189 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 SLC35E2BP0CK96 405 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 CD46P15529 392 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 TCF3P15923 654 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 RORAP35398 523 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 DRD3P35462 400 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 RAD23AP54725 363 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 SERTAD2Q14140 314 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 NR1D2Q14995 579 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 NKAIN1Q4KMZ8 207 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 FAM91A1Q658Y4 838 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 CDC73Q6P1J9 531 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 SLC35F3Q8IY50 421 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 IQCKQ8N0W5 287 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 MRGPRX3Q96LB0 322 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 CCDC74BQ96LY2 380 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 NPAS2Q99743 824 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 NUDT22Q9BRQ3 303 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 SLC35A5Q9BS91 424 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 MFRPQ9BY79 579 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 NLGN3Q9NZ94 848 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 GIMAP2Q9UG22 337 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 STOML2Q9UJZ1 356 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 POU2F3Q9UKI9 436 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 C1orf226A1L170 272 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 KPNA4O00629 521 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-229ENST00000622668 SNX4O95219 450 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 CEACAM5P06731 702 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 PORP16435 677 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-229ENST00000622668 DGKQP52824 942 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 SCUBE1Q8IWY4 988 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 OR14L1PQ8NHC6 308 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 ADAMTS18Q8TE60 1221 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 ANKRD49Q8WVL7 239 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 TEFMQ96QE5 360 aaKnown RBP8.68□□□□□ -1.02
HDAC9-229ENST00000622668 KIR3DX1Q9H7L2 352 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 WASH6PQ9NQA3 447 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 EBF1Q9UH73 591 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 WDR45Q9Y484 360 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 VSTM5A8MXK1 200 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 CASKO14936 926 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 UBTFL6P0CB48 400 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-229ENST00000622668 CD247P20963 164 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 CLCN2P51788 898 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 HK2P52789 917 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 DPTQ07507 201 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 OR4D1Q15615 310 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 TTMPQ5BVD1 217 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 OR4C11Q6IEV9 310 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 ZNF730Q6ZMV8 503 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 RANBP3LQ86VV4 465 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-229ENST00000622668 WDR5BQ86VZ2 330 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 TDRPQ86YL5 185 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 ZADH2Q8N4Q0 377 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 TMEM105Q8N8V8 129 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 BANPQ8N9N5 519 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 OR7G3Q8NG95 312 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 OR1F2PQ96R84 312 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 LUZP4Q9P127 313 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 CIB4A0PJX0 185 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 SAC3D1A6NKF1 404 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 STMND1H3BQB6 276 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 I6L893 689 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-229ENST00000622668 WWP2O00308 870 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 LDB3O75112 727 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 UGT2B17O75795 530 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 PGM3O95394 542 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 COX4I1P13073 169 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 ICAM2P13598 275 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 CR2P20023 1033 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 YAP1P46937 504 aaKnown RBP8.68□□□□□ -1.02
HDAC9-229ENST00000622668 IDH2P48735 452 aaKnown RBP8.68□□□□□ -1.02
HDAC9-229ENST00000622668 RNF144AP50876 292 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-229ENST00000622668 SMIM11AP58511 58 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 SPIBQ01892 262 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 C10orf62Q5T681 223 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-229ENST00000622668 IL20RBQ6UXL0 311 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 EID3Q8N140 333 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 LRRC25Q8N386 305 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-229ENST00000622668 NETO1Q8TDF5 533 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 GRHL3Q8TE85 626 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms