RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 RB1P06400 928 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 PSMB5P28074 263 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 UNC5DQ6UXZ4 953 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 Q6ZNX1 250 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 OXR1Q8N573 874 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 ANKRD53Q8N9V6 530 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 NDNFQ8TB73 568 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 SUSD6Q92537 303 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 FGF13Q92913 245 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 F2RL3Q96RI0 385 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 GABARAPL3Q9BY60 117 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 TMEM38AQ9H6F2 299 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 C5AR2Q9P296 337 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 RAB23Q9ULC3 237 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 PNMA8BQ9ULN7 279 aaPredicted RBP11.43□□□□□ -0.58
TP53-227ENST00000622645 RNF6Q9Y252 685 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 LCKP06239 509 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 POU2F1P14859 743 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 KELP23276 732 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 RPL3P39023 403 aaKnown RBP11.43□□□□□ -0.58
TP53-227ENST00000622645 CCR3P51677 355 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 VBP1P61758 197 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 FADDQ13158 208 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 EIF4HQ15056 248 aaKnown RBP11.43□□□□□ -0.58
TP53-227ENST00000622645 EXOC3L2Q2M3D2 409 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 SYT6Q5T7P8 510 aaPredicted RBP11.43□□□□□ -0.58
TP53-227ENST00000622645 PNCKQ6P2M8 343 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 LCTLQ6UWM7 567 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 DCUN1D3Q8IWE4 304 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 ADGRF3Q8IZF5 1079 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 KRT78Q8N1N4 520 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 OR9Q2Q8NGE9 314 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 UBE2E3Q969T4 207 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 COX14Q96I36 57 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 CXorf36Q9H7Y0 433 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 SLAMF7Q9NQ25 335 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 PRSS16Q9NQE7 514 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 PRKAG2Q9UGJ0 569 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 HCN2Q9UL51 889 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 E9PQ18 207 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 H7BY64 318 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 HNRNPCP07910 306 aaKnown RBP eCLIP11.43□□□□□ -0.58
TP53-227ENST00000622645 C21orf33P30042 268 aaPredicted RBP11.43□□□□□ -0.58
TP53-227ENST00000622645 OPRL1P41146 370 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 WASP42768 502 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 IDH2P48735 452 aaKnown RBP11.43□□□□□ -0.58
TP53-227ENST00000622645 ALDH9A1P49189 494 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 PHEXP78562 749 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 MVKQ03426 396 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 RBBP4Q09028 425 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 GANABQ14697 944 aaKnown RBP11.43□□□□□ -0.58
TP53-227ENST00000622645 CYP2A13Q16696 494 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 C17orf64Q86WR6 236 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 P3H2Q8IVL5 708 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 LGI4Q8N135 537 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 ZNF784Q8NCA9 323 aaPredicted RBP11.43□□□□□ -0.58
TP53-227ENST00000622645 OR4C15Q8NGM1 316 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 SMARCD2Q92925 531 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 YIPF6Q96EC8 236 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 PRAP1Q96NZ9 151 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 ZNF717Q9BY31 904 aaPredicted RBP11.43□□□□□ -0.58
TP53-227ENST00000622645 RHCGQ9UBD6 479 aa11.43□□□□□ -0.58
TP53-227ENST00000622645 ANKDD1BA6NHY2 528 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 GRXCR1A8MXD5 290 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 PCDH17O14917 1159 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 MAPK12P53778 367 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 CDK3Q00526 305 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 DUSP7Q16829 419 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 MICAQ29983 383 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 PIP5KL1Q5T9C9 394 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 PRSS48Q7RTY5 328 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 BTLAQ7Z6A9 289 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 SLCO6A1Q86UG4 719 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 P2RY8Q86VZ1 359 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 SLC44A2Q8IWA5 706 aaPredicted RBP11.42□□□□□ -0.58
TP53-227ENST00000622645 PROX1Q92786 737 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 RPL3LQ92901 407 aaKnown RBP11.42□□□□□ -0.58
TP53-227ENST00000622645 ARMC5Q96C12 935 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 MTERF3Q96E29 417 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 ZNF347Q96SE7 839 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 ALOXE3Q9BYJ1 711 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 FAIMQ9NVQ4 179 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 SELENONQ9NZV5 590 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 AP1M2Q9Y6Q5 423 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 C5orf67F2Z3F1 127 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 TGFBR1P36897 503 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 ST13P50502 369 aaKnown RBP11.42□□□□□ -0.58
TP53-227ENST00000622645 NCS1P62166 190 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 NR1D2Q14995 579 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 ZNF630Q2M218 657 aaPredicted RBP11.42□□□□□ -0.58
TP53-227ENST00000622645 WSCD2Q2TBF2 565 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 CRB2Q5IJ48 1285 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 DEPDC1Q5TB30 811 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 KHDRBS2Q5VWX1 349 aaKnown RBP11.42□□□□□ -0.58
TP53-227ENST00000622645 TNFAIP8L2Q6P589 184 aaPredicted RBP11.42□□□□□ -0.58
TP53-227ENST00000622645 CEACAM20Q6UY09 585 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 CCDC80Q76M96 950 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 ZNF554Q86TJ5 538 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 CCDC103Q8IW40 242 aa11.42□□□□□ -0.58
TP53-227ENST00000622645 OR5K2Q8NHB8 316 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms