RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 PSMA8Q8TAA3 256 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 ZNF296Q8WUU4 475 aaPredicted RBP9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 MYLIPQ8WY64 445 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 ZNF514Q96K75 400 aaPredicted RBP9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 CDCA4Q9BXL8 241 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 OR51B5Q9H339 312 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 MTG2Q9H4K7 406 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 ARMC7Q9H6L4 198 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 SP140LQ9H930 580 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 RLIMQ9NVW2 624 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 TRNAU1APQ9NX07 287 aaKnown RBP9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 CNOT2Q9NZN8 540 aaKnown RBP9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 FTSJ1Q9UET6 329 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 DOLKQ9UPQ8 538 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 HCN4Q9Y3Q4 1203 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 ZNF451Q9Y4E5 1061 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 UGT2A1Q9Y4X1 527 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 KLK4Q9Y5K2 254 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 IRAK3Q9Y616 596 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 NOTCH4Q99466 2003 aa9.2□□□□□ -0.94
IGHV3-54-201ENST00000622166 DENND4AQ7Z401 1863 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 PRAMEF33A0A0G2JMD5 474 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 TRBC2A0A5B9 178 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 TMEM247A6NEH6 219 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 EFCAB10A6NFE3 127 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 TMEM221A6NGB7 291 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 ZAR1LA6NP61 321 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 PLK4O00444 970 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 PCDH17O14917 1159 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 PRAMEF10O60809 474 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 SEMA3DO95025 777 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 RECKO95980 971 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 TGFB1P01137 390 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 RPLP0P05388 317 aaKnown RBP9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 STSP08842 583 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 CLTBP09497 229 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 PIPP12273 146 aaPredicted RBP9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 TNFRSF1BP20333 461 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 CHMP24386 653 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 CHI3L1P36222 383 aaPredicted RBP9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 ALDH9A1P49189 494 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 TAS2R50P59544 299 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 DSTNP60981 165 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 DPTQ07507 201 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 SYT16Q17RD7 645 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 ZNF181Q2M3W8 571 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 INAVAQ3KP66 663 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 TMEM52BQ4KMG9 183 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 SAXO2Q658L1 398 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 VN1R5Q7Z5H4 357 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 SLC9B2Q86UD5 537 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 RNF130Q86XS8 419 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 CFAP206Q8IYR0 622 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 KRT78Q8N1N4 520 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 TMIEQ8NEW7 156 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 ZNF675Q8TD23 568 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 APOBEC4Q8WW27 367 aaKnown RBP9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 SORCS1Q8WY21 1168 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 OR5P2Q8WZ92 322 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 PROX1Q92786 737 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 CIDECQ96AQ7 238 aaPredicted RBP9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 PDXPQ96GD0 296 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 ZNF764Q96H86 408 aaPredicted RBP9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 YME1L1Q96TA2 773 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 NIPSNAP1Q9BPW8 284 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 TCF25Q9BQ70 676 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 WRAP53Q9BUR4 548 aaKnown RBP9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 ZDHHC5Q9C0B5 715 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 SPNS1Q9H2V7 528 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 RHBGQ9H310 441 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 DPEP2Q9H4A9 486 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 NT5DC2Q9H857 520 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 ZNF556Q9HAH1 456 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 PELI2Q9HAT8 420 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 TRIM39Q9HCM9 518 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 A4GALTQ9NPC4 353 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 CCDC177Q9NQR7 707 aaPredicted RBP9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 AHSPQ9NZD4 102 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 KCND3Q9UK17 655 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 DUSP12Q9UNI6 340 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 GPR34Q9UPC5 381 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 SLC27A6Q9Y2P4 619 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 WNT6Q9Y6F9 365 aa9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 NUP210Q8TEM1 1887 aaPredicted RBP9.19□□□□□ -0.94
IGHV3-54-201ENST00000622166 AGAP5A6NIR3 686 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 MUC22E2RYF6 1773 aaPredicted RBP9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 DSCR3O14972 297 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 HOXC11O43248 304 aaPredicted RBP9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 AQP9O43315 295 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 VEGFDO43915 354 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 CNOT3O75175 753 aaKnown RBP9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 POP7O75817 140 aaKnown RBP9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 UPK1BO75841 260 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 GADD45GO95257 159 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 OXSR1O95747 527 aaPredicted RBP9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 PRNPP04156 253 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 KLK1P06870 262 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 RHOP08100 348 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 IL3P08700 152 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 ADORA3P0DMS8 318 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms