RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 OMPP47874 163 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 NR1H2P55055 460 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 RPS26P62854 115 aaKnown RBP8.87□□□□□ -0.99
GGA3-223ENST00000621870 POU6F2P78424 691 aaPredicted RBP8.87□□□□□ -0.99
GGA3-223ENST00000621870 RPA4Q13156 261 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 ATP1A4Q13733 1029 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 STEAP4Q687X5 459 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 NANOGNBQ7Z5D8 188 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 OR7G3Q8NG95 312 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 TSEN15Q8WW01 171 aaKnown RBP8.87□□□□□ -0.99
GGA3-223ENST00000621870 GEMIN6Q8WXD5 167 aaKnown RBP8.87□□□□□ -0.99
GGA3-223ENST00000621870 RFKQ969G6 155 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 ZNF317Q96PQ6 595 aaPredicted RBP8.87□□□□□ -0.99
GGA3-223ENST00000621870 ZNF347Q96SE7 839 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 MARCH7Q9H992 704 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 TBC1D17Q9HA65 648 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 LRIT1Q9P2V4 623 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 PADI2Q9Y2J8 665 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 SOX1O00570 391 aaPredicted RBP8.87□□□□□ -0.99
GGA3-223ENST00000621870 TP53I11O14683 189 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 RGS10O43665 173 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 KCNJ13O60928 360 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 ANXA8P13928 327 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 FUT4P22083 530 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 PTGES3Q15185 160 aaKnown RBP8.87□□□□□ -0.99
GGA3-223ENST00000621870 DUSP6Q16828 381 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 ZNF630Q2M218 657 aaPredicted RBP8.87□□□□□ -0.99
GGA3-223ENST00000621870 REEP3Q6NUK4 255 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 ZNF551Q7Z340 670 aaPredicted RBP8.87□□□□□ -0.99
GGA3-223ENST00000621870 TMPRSS9Q7Z410 1059 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 CHERPQ8IWX8 916 aaKnown RBP8.87□□□□□ -0.99
GGA3-223ENST00000621870 OR52E4Q8NGH9 312 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 CRB3Q9BUF7 120 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 TMEM30AQ9NV96 361 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 LHX3Q9UBR4 397 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 MYH7BA7E2Y1 1941 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 ARHGEF33A8MVX0 844 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 FAM227AF5H4B4 570 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 SLC22A2O15244 555 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 DFNA5O60443 496 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 CREG1O75629 220 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 CSTAP01040 98 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 OR12D1P0DN82 309 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 CCR7P32248 378 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 RPL5P46777 297 aaKnown RBP8.87□□□□□ -0.99
GGA3-223ENST00000621870 OR1E2P47887 323 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 ACY1Q03154 408 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 LAPTM4AQ15012 233 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 TRIM61Q5EBN2 209 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 TCTE1Q5JU00 501 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 FIGNL1Q6PIW4 674 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 RNF111Q6ZNA4 994 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 GPAT4Q86UL3 456 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.87□□□□□ -0.99
GGA3-223ENST00000621870 NUP43Q8NFH3 380 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 KBTBD8Q8NFY9 601 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 MYADMQ96S97 322 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 MCHR1Q99705 422 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 COQ7Q99807 217 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 TRIM2Q9C040 744 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 RHCGQ9UBD6 479 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 OAZ3Q9UMX2 235 aa8.87□□□□□ -0.99
GGA3-223ENST00000621870 TNRC6CQ9HCJ0 1690 aaKnown RBP8.86□□□□□ -0.99
GGA3-223ENST00000621870 LOC285095A0A1B0GVY8 99 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 SLC9B1P1A6NJY1 282 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 AQP12BA6NM10 295 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 HHLA1C9JL84 531 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 CLEC3AO75596 197 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 PSMA1P25786 263 aaKnown RBP8.86□□□□□ -0.99
GGA3-223ENST00000621870 MNDAP41218 407 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 SLC6A9P48067 706 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 SH3BP2P78314 561 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 PLCXD2Q0VAA5 305 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 KRR1Q13601 381 aaKnown RBP8.86□□□□□ -0.99
GGA3-223ENST00000621870 LRP8Q14114 963 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 NIPAL1Q6NVV3 410 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 ZCCHC12Q6PEW1 402 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 ADGRD2Q7Z7M1 963 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 AQP12AQ8IXF9 295 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 UBQLNLQ8IYU4 475 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 EID2Q8N6I1 236 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 ZSCAN1Q8NBB4 408 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 SEC14L1Q92503 715 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 ARRDC3Q96B67 414 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 EPYCQ99645 322 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 FOXQ1Q9C009 403 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 TMEM168Q9H0V1 697 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 COQ10BQ9H8M1 238 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 ACTR10Q9NZ32 417 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 MARK1Q9P0L2 795 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 CPNE7Q9UBL6 633 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 CKLFQ9UBR5 152 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 ACSL6Q9UKU0 697 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 DNAJC15Q9Y5T4 150 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 SPAG17Q6Q759 2223 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 C1orf226A1L170 272 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 PRSS38A1L453 326 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 RENP00797 406 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 CAPGP40121 348 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 PGFP49763 221 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms