RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 IRF9Q00978 393 aa16.86■□□□□ 0.29
SCAMP4-213ENST00000621748 RUNX2Q13950 521 aa16.86■□□□□ 0.29
SCAMP4-213ENST00000621748 EXT1Q16394 746 aa16.86■□□□□ 0.29
SCAMP4-213ENST00000621748 KRT71Q3SY84 523 aa16.86■□□□□ 0.29
SCAMP4-213ENST00000621748 ADGRD1Q6QNK2 874 aa16.86■□□□□ 0.29
SCAMP4-213ENST00000621748 QSOX2Q6ZRP7 698 aa16.86■□□□□ 0.29
SCAMP4-213ENST00000621748 DCAKDQ8WVC6 231 aa16.86■□□□□ 0.29
SCAMP4-213ENST00000621748 KCTD4Q8WVF5 259 aa16.86■□□□□ 0.29
SCAMP4-213ENST00000621748 FAR1Q8WVX9 515 aa16.86■□□□□ 0.29
SCAMP4-213ENST00000621748 GAL3ST3Q96A11 431 aa16.86■□□□□ 0.29
SCAMP4-213ENST00000621748 LPAR4Q99677 370 aa16.86■□□□□ 0.29
SCAMP4-213ENST00000621748 RNF32Q9H0A6 362 aa16.86■□□□□ 0.29
SCAMP4-213ENST00000621748 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.86■□□□□ 0.297e-7■□□□□ 9.5
SCAMP4-213ENST00000621748 STMN4Q9H169 189 aaPredicted RBP16.86■□□□□ 0.29
SCAMP4-213ENST00000621748 CENPHQ9H3R5 247 aa16.86■□□□□ 0.29
SCAMP4-213ENST00000621748 KCNK13Q9HB14 408 aa16.86■□□□□ 0.29
SCAMP4-213ENST00000621748 MMP25Q9NPA2 562 aa16.86■□□□□ 0.29
SCAMP4-213ENST00000621748 NUDT4Q9NZJ9 180 aa16.86■□□□□ 0.29
SCAMP4-213ENST00000621748 ACOT9Q9Y305 439 aa16.86■□□□□ 0.29
SCAMP4-213ENST00000621748 A0A087X1B8 175 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 ANKDD1BA6NHY2 528 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 SUPT3HB4E1H0 165 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 E2F3O00716 465 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 ERI3O43414 337 aaKnown RBP16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 KERAO60938 352 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 SUPT3HO75486 399 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 MTHFD2P13995 350 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 MAOAP21397 527 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 GSTM2P28161 218 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 SLC26A5P58743 744 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 ACER2Q5QJU3 275 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 KLC3Q6P597 504 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 LRIG3Q6UXM1 1119 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 TDRPQ86YL5 185 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 CRLF3Q8IUI8 442 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 PTCD3Q96EY7 689 aaKnown RBP16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 SEC16BQ96JE7 1060 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 FAR2Q96K12 515 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 QRFPRQ96P65 431 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 TAAR6Q96RI8 345 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 NPAS2Q99743 824 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 EPB41L4BQ9H329 900 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 NECTIN3Q9NQS3 549 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 TEKT2Q9UIF3 430 aa16.85■□□□□ 0.29
SCAMP4-213ENST00000621748 NBPF19A0A087WUL8 3843 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 IGKV3D-11A0A0A0MRZ8 115 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 OR5H15A6NDH6 313 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 TRIM49D1C9J1S8 452 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 PSMD12O00232 456 aaPredicted RBP16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 RGS16O15492 202 aaPredicted RBP16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 MAN1A2O60476 641 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 ST13P50502 369 aaKnown RBP16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 PLA2G16P53816 162 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 IRF8Q02556 426 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 CHIT1Q13231 466 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 E2F2Q14209 437 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 CASP8Q14790 479 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 TBCCQ15814 346 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 ADPRMQ3LIE5 342 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 CEP85LQ5SZL2 805 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 LRRC70Q7Z2Q7 622 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 CYP4X1Q8N118 509 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 ST6GALNAC3Q8NDV1 305 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 OR2L5Q8NG80 312 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 OR2W6PQ8NHA6 318 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 PKNOX2Q96KN3 472 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 ZNF354BQ96LW1 612 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 EFCAB11Q9BUY7 163 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 REXO4Q9GZR2 422 aaKnown RBP16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 VPS11Q9H270 941 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 PRDM9Q9NQV7 894 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 SNX15Q9NRS6 342 aa16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 DIDO1Q9BTC0 2240 aaKnown RBP16.84■□□□□ 0.29
SCAMP4-213ENST00000621748 TCRBV16S1A1N1A0A5B0 115 aa16.83■□□□□ 0.28
SCAMP4-213ENST00000621748 ALDOAP04075 364 aaKnown RBP16.83■□□□□ 0.28
SCAMP4-213ENST00000621748 H2AFXP16104 143 aaPredicted RBP16.83■□□□□ 0.28
SCAMP4-213ENST00000621748 CASP2P42575 452 aa16.83■□□□□ 0.28
SCAMP4-213ENST00000621748 ELOAQ14241 798 aaKnown RBP16.83■□□□□ 0.28
SCAMP4-213ENST00000621748 RASA2Q15283 850 aa16.83■□□□□ 0.28
SCAMP4-213ENST00000621748 FAM83EQ2M2I3 478 aa16.83■□□□□ 0.28
SCAMP4-213ENST00000621748 ZNF324BQ6AW86 544 aaPredicted RBP16.83■□□□□ 0.28
SCAMP4-213ENST00000621748 ABHD17CQ6PCB6 329 aa16.83■□□□□ 0.28
SCAMP4-213ENST00000621748 FAM180AQ6UWF9 173 aa16.83■□□□□ 0.28
SCAMP4-213ENST00000621748 BEST3Q8N1M1 668 aa16.83■□□□□ 0.28
SCAMP4-213ENST00000621748 KIF2BQ8N4N8 673 aa16.83■□□□□ 0.28
SCAMP4-213ENST00000621748 RHEBL1Q8TAI7 183 aa16.83■□□□□ 0.28
SCAMP4-213ENST00000621748 ELP5Q8TE02 316 aa16.83■□□□□ 0.28
SCAMP4-213ENST00000621748 EPS8L3Q8TE67 593 aaKnown RBP16.83■□□□□ 0.28
SCAMP4-213ENST00000621748 SSC4DQ8WTU2 575 aa16.83■□□□□ 0.28
SCAMP4-213ENST00000621748 UBTD2Q8WUN7 234 aa16.83■□□□□ 0.28
SCAMP4-213ENST00000621748 GPR78Q96P69 363 aa16.83■□□□□ 0.28
SCAMP4-213ENST00000621748 F2RL3Q96RI0 385 aa16.83■□□□□ 0.28
SCAMP4-213ENST00000621748 SLX1AQ9BQ83 275 aa16.83■□□□□ 0.28
SCAMP4-213ENST00000621748 NPLQ9BXD5 320 aaPredicted RBP16.83■□□□□ 0.28
SCAMP4-213ENST00000621748 ERRFI1Q9UJM3 462 aaPredicted RBP16.83■□□□□ 0.28
SCAMP4-213ENST00000621748 NAV2Q8IVL1 2488 aa16.82■□□□□ 0.28
SCAMP4-213ENST00000621748 A0A096LPK6 155 aa16.82■□□□□ 0.28
SCAMP4-213ENST00000621748 A8MUA0 341 aa16.82■□□□□ 0.28
SCAMP4-213ENST00000621748 K7EPI3 171 aa16.82■□□□□ 0.28
SCAMP4-213ENST00000621748 EDN3P14138 238 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms