RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 RPP14O95059 124 aaKnown RBP9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 MPC1LP0DKB6 136 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 ARSAP15289 507 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 GADD45AP24522 165 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 ECHS1P30084 290 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 CD6P30203 668 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 TDGQ13569 410 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 TGFBIQ15582 683 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 ZNF630Q2M218 657 aaPredicted RBP9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 VASH1Q7L8A9 365 aaPredicted RBP9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 TMEM17Q86X19 198 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 APCDD1Q8J025 514 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 SDR16C5Q8N3Y7 309 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 OR14L1PQ8NHC6 308 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 NR4A3Q92570 626 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 ITFG2Q969R8 447 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 MRM3Q9HC36 420 aaKnown RBP9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 HEBP1Q9NRV9 189 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 ZNF221Q9UK13 617 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 TMEM5Q9Y2B1 443 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 HCFC2Q9Y5Z7 792 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 FKBP7Q9Y680 259 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 PLD2O14939 933 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 RAP2AP10114 183 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 ACRV1P26436 265 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 KLF1Q13351 362 aaPredicted RBP9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 PTPRCAPQ14761 206 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 RBM20Q5T481 1227 aaKnown RBP9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 ARL9Q6T311 187 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 CCDC116Q8IYX3 515 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 ZNF689Q96CS4 500 aaPredicted RBP9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 SMURF1Q9HCE7 757 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 TMEM184CQ9NVA4 438 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 HCFC1R1Q9NWW0 138 aa9.43□□□□□ -0.9
CLTCL1-211ENST00000621271 HTR3EA5X5Y0 456 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 EFCAB9A8MZ26 197 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 SOX30O94993 753 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 CHRM1P11229 460 aaPredicted RBP9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 SLC6A6P31641 620 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 RORAP35398 523 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 ENTPD1P49961 510 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 SLC25A11Q02978 314 aaKnown RBP9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 SRYQ05066 204 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 DSC3Q14574 896 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 SGCAQ16586 387 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 GPR153Q6NV75 609 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 NCEH1Q6PIU2 408 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 CPNE8Q86YQ8 564 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 ZNF283Q8N7M2 679 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 NAT8LQ8N9F0 302 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 DNAAF1Q8NEP3 725 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 NFKBIDQ8NI38 313 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 TNFAIP8L1Q8WVP5 186 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 TMEM40Q8WWA1 233 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 DIRAS2Q96HU8 199 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 CHCHD6Q9BRQ6 235 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 UCK2Q9BZX2 261 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 ZBTB20Q9HC78 741 aaPredicted RBP9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 ZIM2Q9NZV7 527 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 RBMX2Q9Y388 322 aaKnown RBP9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 ZNF878C9JN71 531 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 M0R2N6 131 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 KDM4BO94953 1096 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 C6orf47O95873 294 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 PGCP20142 388 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 PDHA2P29803 388 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 MECP2P51608 486 aaKnown RBP9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 BTBD16Q32M84 506 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 ZFP69Q49AA0 526 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 GTF2IRD2BQ6EKJ0 949 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 TXNRD3NBQ6F5E7 133 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 FIGLAQ6QHK4 219 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 PAMR1Q6UXH9 720 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 ZNF627Q7L945 461 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 GTF2IRD2Q86UP8 949 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 ZNF761Q86XN6 746 aaPredicted RBP9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 NLGN4XQ8N0W4 816 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 KLHL36Q8N4N3 616 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 FRS2Q8WU20 508 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 DNAJA4Q8WW22 397 aaPredicted RBP9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 SLC2A13Q96QE2 648 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 TMEM121BQ9BXQ6 578 aaPredicted RBP9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 PREBQ9HCU5 417 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 SLC17A6Q9P2U8 582 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 RIMKLBQ9ULI2 386 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 PCDHB14Q9Y5E9 798 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 PRSS51A0A1B0GVH4 220 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 K7ERQ8 282 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 M0QX08 132 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 NNATQ16517 81 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 C5orf22Q49AR2 442 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 PDSS2Q86YH6 399 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 TDHQ8IZJ6 230 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 LGI4Q8N135 537 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 ARMC10Q8N2F6 343 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 SLC5A8Q8N695 610 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 TAMM41Q96BW9 452 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 DNAJB9Q9UBS3 223 aa9.42□□□□□ -0.9
CLTCL1-211ENST00000621271 PISDQ9UG56 409 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms