RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 POLR2EP19388 210 aaKnown RBP18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 TIA1P31483 386 aaKnown RBP eCLIP18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 DGKEP52429 567 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 CRB2Q5IJ48 1285 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 ZNF770Q6IQ21 691 aaPredicted RBP18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 SLC8B1Q6J4K2 584 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 ADAMTS19Q8TE59 1207 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 TTYH2Q9BSA4 534 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 BHLHE41Q9C0J9 482 aaPredicted RBP18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 TMEM38AQ9H6F2 299 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 TRPV5Q9NQA5 729 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 ABCB8Q9NUT2 735 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 CLEC2DQ9UHP7 191 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 ATP6V1HQ9UI12 483 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 ACSL6Q9UKU0 697 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 ENPP4Q9Y6X5 453 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 DSPPQ9NZW4 1301 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 GNG14A0A1W2PPG7 69 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 ARHGEF33A8MVX0 844 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 LATS1O95835 1130 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 C6orf47O95873 294 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 RECKO95980 971 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 ZNF8P17098 575 aaPredicted RBP18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 CSTF2P33240 577 aaKnown RBP eCLIP18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 RPS5P46782 204 aaKnown RBP18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 TGM4P49221 684 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 RORCP51449 518 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 LRRC74AQ0VAA2 488 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 HYAL2Q12891 473 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 FOXD4Q12950 439 aaPredicted RBP18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 KCNC3Q14003 757 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 SPIN4Q56A73 249 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 FAM46DQ8NEK8 389 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 CLP1Q92989 425 aaKnown RBP18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 SLC22A12Q96S37 553 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 SNTG1Q9NSN8 517 aa18.74■□□□□ 0.59
PDLIM3-212ENST00000620787 ARRDC5A6NEK1 342 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 ZNF670-ZNF695F2Z2N8 137 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 MTX2O75431 263 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 GALTP07902 379 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 POU1F1P28069 291 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 CDK6Q00534 326 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 GDPGP1Q6ZNW5 385 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 IL4I1Q96RQ9 567 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 MMP28Q9H239 520 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 BRD9Q9H8M2 597 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 C11orf16Q9NQ32 467 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 TIGARQ9NQ88 270 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 PAQR5Q9NXK6 330 aaPredicted RBP18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 RHCGQ9UBD6 479 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 SEC14L4Q9UDX3 406 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 BRCA2P51587 3418 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 FAM227AF5H4B4 570 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 PRIM2P49643 509 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 NAE1Q13564 534 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 TAB1Q15750 504 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 FAM181AQ8N9Y4 354 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 OR7G3Q8NG95 312 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 OR2AP1Q8NGE2 309 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 HUS1BQ8NHY5 278 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 CXorf40BQ96DE9 158 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 MED8Q96G25 268 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 TMEM121BQ9BXQ6 578 aaPredicted RBP18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 WDR70Q9NW82 654 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 CD84Q9UIB8 345 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 CLEC4EQ9ULY5 219 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 MAU2Q9Y6X3 613 aa18.73■□□□□ 0.59
PDLIM3-212ENST00000620787 LINC00854A0A1B0GVQ3 168 aa18.72■□□□□ 0.59
PDLIM3-212ENST00000620787 TFECO14948 347 aaPredicted RBP18.72■□□□□ 0.59
PDLIM3-212ENST00000620787 GSTM1P09488 218 aa18.72■□□□□ 0.59
PDLIM3-212ENST00000620787 PRKCAP17252 672 aa18.72■□□□□ 0.59
PDLIM3-212ENST00000620787 PCBP3P57721 371 aaKnown RBP18.72■□□□□ 0.59
PDLIM3-212ENST00000620787 USP45Q70EL2 814 aa18.72■□□□□ 0.59
PDLIM3-212ENST00000620787 OXR1Q8N573 874 aa18.72■□□□□ 0.59
PDLIM3-212ENST00000620787 SLC7A6Q92536 515 aa18.72■□□□□ 0.59
PDLIM3-212ENST00000620787 REEP4Q9H6H4 257 aa18.72■□□□□ 0.59
PDLIM3-212ENST00000620787 TRIM39Q9HCM9 518 aa18.72■□□□□ 0.59
PDLIM3-212ENST00000620787 STUB1Q9UNE7 303 aa18.72■□□□□ 0.59
PDLIM3-212ENST00000620787 CMAHPQ9Y471 501 aa18.72■□□□□ 0.59
PDLIM3-212ENST00000620787 NINQ8N4C6 2090 aa18.72■□□□□ 0.59
PDLIM3-212ENST00000620787 IQCMA0A1B0GVH7 501 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 FADS2P1A8MWK0 482 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 RHCEP18577 417 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 CCND3P30281 292 aaPredicted RBP18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 RPS13P62277 151 aaKnown RBP18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 SNRPGP62308 76 aaKnown RBP18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 SPHARQ15513 63 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 AGTRAPQ6RW13 159 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 Q6ZNB5 142 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 FAM217AQ8IXS0 508 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 CIDECQ96AQ7 238 aaPredicted RBP18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 ECHDC3Q96DC8 303 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 SAMD11Q96NU1 681 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 NDUFB11Q9NX14 153 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 DNAJC27Q9NZQ0 273 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 STOX2Q9P2F5 926 aaPredicted RBP18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 KLHL20Q9Y2M5 609 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 PPIL1Q9Y3C6 166 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms