RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 B3GALT1Q9Y5Z6 326 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 TSTD3H0UI37 97 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF701M0R085 212 aaPredicted RBP4.86□□□□□ -1.63
VPS13D-214ENST00000620676 CYP17A1P05093 508 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 LIPAP38571 399 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 SMIM11AP58511 58 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 STXBP1P61764 594 aaKnown RBP4.86□□□□□ -1.63
VPS13D-214ENST00000620676 CRHR2Q13324 411 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 PGM5Q15124 567 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 TMEM159Q96B96 161 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 OR51I1Q9H343 314 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 GLOD4Q9HC38 313 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.86□□□□□ -1.632e-6■■■□□ 18.3
VPS13D-214ENST00000620676 ZNF230Q9UIE0 474 aaPredicted RBP4.86□□□□□ -1.63
VPS13D-214ENST00000620676 TLR6Q9Y2C9 796 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 GPR89AB7ZAQ6 455 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 F5H5T6 163 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 ALPLP05186 524 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 GPR89BP0CG08 455 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 SAGP10523 405 aaPredicted RBP4.86□□□□□ -1.63
VPS13D-214ENST00000620676 CAPN3P20807 821 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 NME2P22392 152 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 SLC6A4P31645 630 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 TAF6P49848 677 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 EMP3P54852 163 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 NKX6-1P78426 367 aaPredicted RBP4.86□□□□□ -1.63
VPS13D-214ENST00000620676 RSU1Q15404 277 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 UNC50Q53HI1 259 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 SLC51BQ86UW2 128 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 FAM46DQ8NEK8 389 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 OR6K6Q8NGW6 343 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 GGHQ92820 318 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 S100A13Q99584 98 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 KXD1Q9BQD3 176 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 ST3GAL5Q9UNP4 418 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 MANBAO00462 879 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 RAMP2O60895 175 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 RAB36O95755 333 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 POMCP01189 267 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 RPLP2P05387 115 aaKnown RBP4.86□□□□□ -1.63
VPS13D-214ENST00000620676 MC4RP32245 332 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF155Q12901 538 aaPredicted RBP4.86□□□□□ -1.63
VPS13D-214ENST00000620676 PRSS48Q7RTY5 328 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 SGTBQ96EQ0 304 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 ACO2Q99798 780 aaKnown RBP4.86□□□□□ -1.63
VPS13D-214ENST00000620676 GPN2Q9H9Y4 310 aaPredicted RBP4.86□□□□□ -1.63
VPS13D-214ENST00000620676 IGSF5Q9NSI5 407 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 C2CD4BA6NLJ0 364 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 RFXAPO00287 272 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 PAPSS2O95340 614 aaPredicted RBP4.86□□□□□ -1.63
VPS13D-214ENST00000620676 ACVR2AP27037 513 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 HOXC5Q00444 222 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 POLR1DQ9Y2S0 133 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 LRRC72A6NJI9 287 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 SOBPA7XYQ1 873 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 KCNJ13O60928 360 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 B3GAT3O94766 335 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 MMP2P08253 660 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 GNALP38405 381 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 OR2B8PP59922 312 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 SLC39A4Q6P5W5 647 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 CREB3L2Q70SY1 520 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 OR4K1Q8NGD4 311 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 FCAMRQ8WWV6 532 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 MRPL48Q96GC5 212 aaKnown RBP4.86□□□□□ -1.63
VPS13D-214ENST00000620676 ASB8Q9H765 288 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 SCML2Q9UQR0 700 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 SULT1B1O43704 296 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 OR6A2O95222 327 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 GTF2F2P13984 249 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 DNASE1L1P49184 302 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 SP2Q02086 613 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 Q3ZCU0 254 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 IER5Q5VY09 327 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 RNLSQ5VYX0 342 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 CES4AQ5XG92 561 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 FKBP10Q96AY3 582 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 MBOAT4Q96T53 435 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 TRMT61BQ9BVS5 477 aaKnown RBP4.86□□□□□ -1.63
VPS13D-214ENST00000620676 SEMA4CQ9C0C4 833 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 FAM171A2A8MVW0 826 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 SLC10A2Q12908 348 aaPredicted RBP4.86□□□□□ -1.63
VPS13D-214ENST00000620676 TIFABQ6ZNK6 161 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF607Q96SK3 696 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 SLC6A7Q99884 636 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 MIOSQ9NXC5 875 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 STUB1Q9UNE7 303 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 SH2B3Q9UQQ2 575 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 A0A0B4J203 849 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 RIIAD1A6NNX1 92 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 CILPO75339 1184 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 ZDHHC11BP0C7U3 371 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 PRSS56P0CW18 603 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 SNRPEP62304 92 aaKnown RBP4.86□□□□□ -1.63
VPS13D-214ENST00000620676 TNFRSF17Q02223 184 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 BIKQ13323 160 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 GTDC1Q4AE62 458 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 ANXA8L1Q5VT79 327 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 SLC30A8Q8IWU4 369 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 ZMIZ2Q8NF64 920 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms