RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 MYBL2P10244 700 aa16.06■□□□□ 0.16
HMGN3-203ENST00000620514 CERS1P27544 350 aa16.06■□□□□ 0.16
HMGN3-203ENST00000620514 PPP2R1BP30154 601 aa16.06■□□□□ 0.16
HMGN3-203ENST00000620514 RAB38P57729 211 aa16.06■□□□□ 0.16
HMGN3-203ENST00000620514 C1QL3Q5VWW1 255 aa16.06■□□□□ 0.16
HMGN3-203ENST00000620514 TRIM40Q6P9F5 258 aa16.06■□□□□ 0.16
HMGN3-203ENST00000620514 ABHD17CQ6PCB6 329 aa16.06■□□□□ 0.16
HMGN3-203ENST00000620514 GFRALQ6UXV0 394 aa16.06■□□□□ 0.16
HMGN3-203ENST00000620514 MAMDC2Q7Z304 686 aaPredicted RBP16.06■□□□□ 0.16
HMGN3-203ENST00000620514 RPS19BP1Q86WX3 136 aaKnown RBP16.06■□□□□ 0.16
HMGN3-203ENST00000620514 SCUBE1Q8IWY4 988 aa16.06■□□□□ 0.16
HMGN3-203ENST00000620514 CENPLQ8N0S6 344 aaPredicted RBP16.06■□□□□ 0.16
HMGN3-203ENST00000620514 FAM47BQ8NA70 645 aa16.06■□□□□ 0.16
HMGN3-203ENST00000620514 ARMC2Q8NEN0 867 aa16.06■□□□□ 0.16
HMGN3-203ENST00000620514 DNAJB8Q8NHS0 232 aa16.06■□□□□ 0.16
HMGN3-203ENST00000620514 SEC16BQ96JE7 1060 aa16.06■□□□□ 0.16
HMGN3-203ENST00000620514 CSF3RQ99062 836 aa16.06■□□□□ 0.16
HMGN3-203ENST00000620514 PRTFDC1Q9NRG1 225 aa16.06■□□□□ 0.16
HMGN3-203ENST00000620514 NINJ2Q9NZG7 142 aa16.06■□□□□ 0.16
HMGN3-203ENST00000620514 ACOT9Q9Y305 439 aa16.06■□□□□ 0.16
HMGN3-203ENST00000620514 MMACHCQ9Y4U1 282 aa16.06■□□□□ 0.16
HMGN3-203ENST00000620514 CLDN16Q9Y5I7 305 aa16.06■□□□□ 0.16
HMGN3-203ENST00000620514 CROCCQ5TZA2 2017 aa16.06■□□□□ 0.16
HMGN3-203ENST00000620514 SH3BGRLO75368 114 aa16.05■□□□□ 0.16
HMGN3-203ENST00000620514 CRYABP02511 175 aaKnown RBP16.05■□□□□ 0.16
HMGN3-203ENST00000620514 C2P06681 752 aa16.05■□□□□ 0.16
HMGN3-203ENST00000620514 MTHFD2P13995 350 aa16.05■□□□□ 0.16
HMGN3-203ENST00000620514 TPP2P29144 1249 aaPredicted RBP16.05■□□□□ 0.16
HMGN3-203ENST00000620514 CASP2P42575 452 aa16.05■□□□□ 0.16
HMGN3-203ENST00000620514 MSH2P43246 934 aa16.05■□□□□ 0.16
HMGN3-203ENST00000620514 LIM2P55344 173 aa16.05■□□□□ 0.16
HMGN3-203ENST00000620514 OC90Q02509 493 aaPredicted RBP16.05■□□□□ 0.16
HMGN3-203ENST00000620514 TBCCQ15814 346 aa16.05■□□□□ 0.16
HMGN3-203ENST00000620514 UAP1Q16222 522 aaPredicted RBP16.05■□□□□ 0.16
HMGN3-203ENST00000620514 WHAMMP3Q1A5X7 153 aa16.05■□□□□ 0.16
HMGN3-203ENST00000620514 UBE3DQ7Z6J8 389 aa16.05■□□□□ 0.16
HMGN3-203ENST00000620514 CLNKQ7Z7G1 428 aa16.05■□□□□ 0.16
HMGN3-203ENST00000620514 FJX1Q86VR8 437 aa16.05■□□□□ 0.16
HMGN3-203ENST00000620514 LGI4Q8N135 537 aa16.05■□□□□ 0.16
HMGN3-203ENST00000620514 UBTD2Q8WUN7 234 aa16.05■□□□□ 0.16
HMGN3-203ENST00000620514 SCMH1Q96GD3 660 aa16.05■□□□□ 0.16
HMGN3-203ENST00000620514 SERINC2Q96SA4 455 aa16.05■□□□□ 0.16
HMGN3-203ENST00000620514 PRDM7Q9NQW5 492 aa16.05■□□□□ 0.16
HMGN3-203ENST00000620514 SNX15Q9NRS6 342 aa16.05■□□□□ 0.16
HMGN3-203ENST00000620514 PNO1Q9NRX1 252 aaKnown RBP16.05■□□□□ 0.16
HMGN3-203ENST00000620514 DMGDHQ9UI17 866 aaKnown RBP16.05■□□□□ 0.16
HMGN3-203ENST00000620514 A0A088AWK7 358 aa16.04■□□□□ 0.16
HMGN3-203ENST00000620514 MYOCOSA0A1B0GUC4 107 aa16.04■□□□□ 0.16
HMGN3-203ENST00000620514 K7EPI3 171 aa16.04■□□□□ 0.16
HMGN3-203ENST00000620514 CYR61O00622 381 aa16.04■□□□□ 0.16
HMGN3-203ENST00000620514 NEURL1O76050 574 aa16.04■□□□□ 0.16
HMGN3-203ENST00000620514 MYO1DO94832 1006 aa16.04■□□□□ 0.16
HMGN3-203ENST00000620514 UNC5CO95185 931 aa16.04■□□□□ 0.16
HMGN3-203ENST00000620514 ZNF10P21506 573 aaPredicted RBP16.04■□□□□ 0.16
HMGN3-203ENST00000620514 MTTPP55157 894 aa16.04■□□□□ 0.16
HMGN3-203ENST00000620514 MLF1P58340 268 aa16.04■□□□□ 0.16
HMGN3-203ENST00000620514 LAPTM5Q13571 262 aa16.04■□□□□ 0.16
HMGN3-203ENST00000620514 E2F2Q14209 437 aa16.04■□□□□ 0.16
HMGN3-203ENST00000620514 HIST2H2ACQ16777 129 aaPredicted RBP16.04■□□□□ 0.16
HMGN3-203ENST00000620514 PAGE2BQ5JRK9 111 aa16.04■□□□□ 0.16
HMGN3-203ENST00000620514 HIST2H2AA3Q6FI13 130 aa16.04■□□□□ 0.16
HMGN3-203ENST00000620514 ZNF793Q6ZN11 406 aa16.04■□□□□ 0.16
HMGN3-203ENST00000620514 NOA1Q8NC60 698 aaKnown RBP16.04■□□□□ 0.16
HMGN3-203ENST00000620514 APCDD1LQ8NCL9 501 aa16.04■□□□□ 0.16
HMGN3-203ENST00000620514 ZNF473Q8WTR7 871 aaKnown RBP16.04■□□□□ 0.16
HMGN3-203ENST00000620514 ZNF592Q92610 1267 aa16.04■□□□□ 0.16
HMGN3-203ENST00000620514 MS4A8Q9BY19 250 aa16.04■□□□□ 0.16
HMGN3-203ENST00000620514 COPS7BQ9H9Q2 264 aaPredicted RBP16.04■□□□□ 0.16
HMGN3-203ENST00000620514 LRFN1Q9P244 771 aa16.04■□□□□ 0.16
HMGN3-203ENST00000620514 OPTCQ9UBM4 332 aa16.04■□□□□ 0.16
HMGN3-203ENST00000620514 SEC14L3Q9UDX4 400 aa16.04■□□□□ 0.16
HMGN3-203ENST00000620514 DAPP1Q9UN19 280 aa16.04■□□□□ 0.16
HMGN3-203ENST00000620514 PCDHGB6Q9Y5F9 930 aa16.04■□□□□ 0.16
HMGN3-203ENST00000620514 DIDO1Q9BTC0 2240 aaKnown RBP16.03■□□□□ 0.16
HMGN3-203ENST00000620514 A0A087X1B8 175 aa16.03■□□□□ 0.16
HMGN3-203ENST00000620514 LRRC14BA6NHZ5 514 aa16.03■□□□□ 0.16
HMGN3-203ENST00000620514 RTCAO00442 366 aaKnown RBP16.03■□□□□ 0.16
HMGN3-203ENST00000620514 ZG16O60844 167 aa16.03■□□□□ 0.16
HMGN3-203ENST00000620514 SP1P08047 785 aa16.03■□□□□ 0.16
HMGN3-203ENST00000620514 PCNAP12004 261 aa16.03■□□□□ 0.16
HMGN3-203ENST00000620514 CD46P15529 392 aa16.03■□□□□ 0.16
HMGN3-203ENST00000620514 HSD17B7P56937 341 aa16.03■□□□□ 0.16
HMGN3-203ENST00000620514 SLC13A2Q13183 592 aa16.03■□□□□ 0.16
HMGN3-203ENST00000620514 ZNF787Q6DD87 383 aa16.03■□□□□ 0.16
HMGN3-203ENST00000620514 SLC25A25Q6KCM7 469 aa16.03■□□□□ 0.16
HMGN3-203ENST00000620514 GALNTL5Q7Z4T8 443 aa16.03■□□□□ 0.16
HMGN3-203ENST00000620514 ZNF227Q86WZ6 799 aa16.03■□□□□ 0.16
HMGN3-203ENST00000620514 RNF175Q8N4F7 328 aa16.03■□□□□ 0.16
HMGN3-203ENST00000620514 MMGT1Q8N4V1 131 aa16.03■□□□□ 0.16
HMGN3-203ENST00000620514 TEX9Q8N6V9 391 aa16.03■□□□□ 0.16
HMGN3-203ENST00000620514 B3GNT7Q8NFL0 401 aa16.03■□□□□ 0.16
HMGN3-203ENST00000620514 THAP3Q8WTV1 239 aaPredicted RBP16.03■□□□□ 0.16
HMGN3-203ENST00000620514 DEFB126Q9BYW3 111 aa16.03■□□□□ 0.16
HMGN3-203ENST00000620514 TSPAN10Q9H1Z9 355 aaPredicted RBP16.03■□□□□ 0.16
HMGN3-203ENST00000620514 PRM3Q9NNZ6 103 aa16.03■□□□□ 0.16
HMGN3-203ENST00000620514 ZNF223Q9UK11 482 aaPredicted RBP16.03■□□□□ 0.16
HMGN3-203ENST00000620514 A0A096LPK6 155 aa16.02■□□□□ 0.16
HMGN3-203ENST00000620514 TRBV11-1A0A0K0K1C0 115 aa16.02■□□□□ 0.16
HMGN3-203ENST00000620514 SAP18O00422 153 aaKnown RBP16.02■□□□□ 0.16
HMGN3-203ENST00000620514 CLDN4O14493 209 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms