RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 CACTIN-AS1Q8N1I8 211 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 GLB1L3Q8NCI6 653 aaPredicted RBP7.61□□□□□ -1.19
CPNE3-209ENST00000620393 ZCCHC10Q8TBK6 192 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 TSPEARQ8WU66 669 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 ERP27Q96DN0 273 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 NSL1Q96IY1 281 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 TEX37Q96LM6 180 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 C10orf90Q96M02 699 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 TSSK3Q96PN8 268 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 OR6C1Q96RD1 312 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 SERINC2Q96SA4 455 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 CMKLR1Q99788 373 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 NPLQ9BXD5 320 aaPredicted RBP7.61□□□□□ -1.19
CPNE3-209ENST00000620393 EBPLQ9BY08 206 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 DPY30Q9C005 99 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 STRADBQ9C0K7 418 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 ACTL8Q9H568 366 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 ANKHQ9HCJ1 492 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 FBXO8Q9NRD0 319 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 IRAK4Q9NWZ3 460 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 OCIAD1Q9NX40 245 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 SIDT1Q9NXL6 827 aaKnown RBP7.61□□□□□ -1.19
CPNE3-209ENST00000620393 AKAP7Q9P0M2 348 aaPredicted RBP7.61□□□□□ -1.19
CPNE3-209ENST00000620393 RAPGEFL1Q9UHV5 662 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 RARRES3Q9UL19 164 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 MAPRE3Q9UPY8 281 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 MRPS2Q9Y399 296 aaKnown RBP7.61□□□□□ -1.19
CPNE3-209ENST00000620393 ASB4Q9Y574 426 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 CAPN7Q9Y6W3 813 aa7.61□□□□□ -1.19
CPNE3-209ENST00000620393 ASCC3Q8N3C0 2202 aaKnown RBP7.61□□□□□ -1.19
CPNE3-209ENST00000620393 ZFHX2Q9C0A1 2572 aaPredicted RBP7.61□□□□□ -1.19
CPNE3-209ENST00000620393 RP1P56715 2156 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 LOC100653049A0A140TA62 436 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 SPAARA0A1B0GVQ0 90 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 FAM234BA2RU67 622 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 EFCAB7A8K855 629 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 GABRR3A8MPY1 467 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 B4E171 279 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 POLR1CO15160 346 aaPredicted RBP7.6□□□□□ -1.19
CPNE3-209ENST00000620393 ZNF749O43361 778 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 PROM1O43490 865 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 AKAP10O43572 662 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 B3GALT2O43825 422 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 DNAJB6O75190 326 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 KRT34O76011 436 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 NSA2O95478 260 aaKnown RBP7.6□□□□□ -1.19
CPNE3-209ENST00000620393 SNRPB2P08579 225 aaKnown RBP7.6□□□□□ -1.19
CPNE3-209ENST00000620393 FTH1P19P0C7X4 201 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 T-ENOLP0DO92 83 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 FGF5P12034 268 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 DRD2P14416 443 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 CD1EP15812 388 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 IL12AP29459 219 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 PRDX6P30041 224 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 TSPAN7P41732 249 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 ZFP36L2P47974 494 aaKnown RBP7.6□□□□□ -1.19
CPNE3-209ENST00000620393 POLR2JP52435 117 aaKnown RBP7.6□□□□□ -1.19
CPNE3-209ENST00000620393 TAS2R50P59544 299 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 SKP1P63208 163 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 SIM1P81133 766 aaPredicted RBP7.6□□□□□ -1.19
CPNE3-209ENST00000620393 FOXM1Q08050 763 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 ZNF763Q0D2J5 394 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 C2orf80Q0P641 193 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 PRAMEF17Q5VTA0 474 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 CYB5D1Q6P9G0 228 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 FOXR1Q6PIV2 292 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 RIPOR1Q6ZS17 1223 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 IKBIPQ70UQ0 350 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 GPR180Q86V85 440 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 TMEM132CQ8N3T6 1108 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 KRTCAP2Q8N6L1 136 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 BMPERQ8N8U9 685 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 OR9I1Q8NGQ6 314 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 CLHC1Q8NHS4 586 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 RP9Q8TA86 221 aaKnown RBP7.6□□□□□ -1.19
CPNE3-209ENST00000620393 CMTM5Q96DZ9 223 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 MVB12AQ96EY5 273 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 DEPDC7Q96QD5 511 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 ZBTB18Q99592 522 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 PRPF18Q99633 342 aaKnown RBP7.6□□□□□ -1.19
CPNE3-209ENST00000620393 NDC1Q9BTX1 674 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 CLMPQ9H6B4 373 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 REEP4Q9H6H4 257 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 COPS7BQ9H9Q2 264 aaPredicted RBP7.6□□□□□ -1.19
CPNE3-209ENST00000620393 LYRM4Q9HD34 91 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 MYNNQ9NPC7 610 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 CUTCQ9NTM9 273 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 ARL8BQ9NVJ2 186 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 LYARQ9NX58 379 aaKnown RBP7.6□□□□□ -1.19
CPNE3-209ENST00000620393 CCDC167Q9P0B6 97 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 KCMF1Q9P0J7 381 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 ATP6V1HQ9UI12 483 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 DAPP1Q9UN19 280 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 CDC14AQ9UNH5 594 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 EXO1Q9UQ84 846 aaKnown RBP7.6□□□□□ -1.19
CPNE3-209ENST00000620393 CLCA2Q9UQC9 943 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 NAALAD2Q9Y3Q0 740 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 ATG4BQ9Y4P1 393 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 UNC13CQ8NB66 2214 aa7.6□□□□□ -1.19
CPNE3-209ENST00000620393 FRYLO94915 3013 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms