RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 ZNF10P21506 573 aaPredicted RBP6.71□□□□□ -1.34
PSMB3-212ENST00000620309 EPHA3P29320 983 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 NEK2P51955 445 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 AQP5P55064 265 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 VSX2P58304 361 aaPredicted RBP6.71□□□□□ -1.34
PSMB3-212ENST00000620309 ARF3P61204 181 aaPredicted RBP6.71□□□□□ -1.34
PSMB3-212ENST00000620309 RPS13P62277 151 aaKnown RBP6.71□□□□□ -1.34
PSMB3-212ENST00000620309 PHEXP78562 749 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 HMGCS1Q01581 520 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 TBL3Q12788 808 aaKnown RBP6.71□□□□□ -1.34
PSMB3-212ENST00000620309 PWP1Q13610 501 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 CUL3Q13618 768 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 DDX39BQ13838 428 aaKnown RBP6.71□□□□□ -1.34
PSMB3-212ENST00000620309 HIST2H2ACQ16777 129 aaPredicted RBP6.71□□□□□ -1.34
PSMB3-212ENST00000620309 MUM1Q2TAK8 710 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 HKDC1Q2TB90 917 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 PRTGQ2VWP7 1150 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 KHDRBS2Q5VWX1 349 aaKnown RBP6.71□□□□□ -1.34
PSMB3-212ENST00000620309 HIST2H2AA3Q6FI13 130 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 OGFOD2Q6N063 350 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 PWWP2BQ6NUJ5 590 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 TMEM214Q6NUQ4 689 aaKnown RBP6.71□□□□□ -1.34
PSMB3-212ENST00000620309 PRMT9Q6P2P2 845 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 FBXO42Q6P3S6 717 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 EPGNQ6UW88 154 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 Q6ZSR9 355 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 SPATA21Q7Z572 469 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 DDIASQ8IXT1 998 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 DSELQ8IZU8 1212 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 OR4N4Q8N0Y3 316 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 CSNK1A1LQ8N752 337 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 GBP7Q8N8V2 638 aaPredicted RBP6.71□□□□□ -1.34
PSMB3-212ENST00000620309 TRPV3Q8NET8 790 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 NKD1Q969G9 470 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 GAL3ST3Q96A11 431 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 MVB12AQ96EY5 273 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 C10orf90Q96M02 699 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 OR52B2Q96RD2 323 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 CCT7Q99832 543 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 TMEM120AQ9BXJ8 343 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 TRIM55Q9BYV6 548 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 LHX9Q9NQ69 397 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 PSD3Q9NYI0 1048 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 IFT80Q9P2H3 777 aaPredicted RBP6.71□□□□□ -1.34
PSMB3-212ENST00000620309 GIMAP2Q9UG22 337 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 IL17BQ9UHF5 180 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 ADGRE2Q9UHX3 823 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 NXT1Q9UKK6 140 aaKnown RBP6.71□□□□□ -1.34
PSMB3-212ENST00000620309 MRPS2Q9Y399 296 aaKnown RBP6.71□□□□□ -1.34
PSMB3-212ENST00000620309 CSMD1Q96PZ7 3565 aa6.71□□□□□ -1.34
PSMB3-212ENST00000620309 A0A0G2JND7 137 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 ATP6AP2A0A1C7CYW4 349 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 LRIT2A6NDA9 550 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 K7ENP7 123 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 PLPP1O14494 284 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 DSCR3O14972 297 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 ZNF749O43361 778 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 RGS14O43566 566 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 SLC28A2O43868 658 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 KLHL41O60662 606 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 ATP6AP2O75787 350 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 MED26O95402 600 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 STATHP02808 62 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 ALDOCP09972 364 aaKnown RBP6.7□□□□□ -1.34
PSMB3-212ENST00000620309 RAB40ALP0C0E4 278 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 LINC00032P0C843 101 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 SFTPCP11686 197 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 LIFP15018 202 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 ALAS2P22557 587 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 FOLR3P41439 243 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 AVPR1BP47901 424 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 IDH3AP50213 366 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 ARFIP1P53367 373 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 EMP3P54852 163 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 RPL38P63173 70 aaKnown RBP6.7□□□□□ -1.34
PSMB3-212ENST00000620309 DCDP81605 110 aaKnown RBP6.7□□□□□ -1.34
PSMB3-212ENST00000620309 RGS1Q08116 209 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 DNASE1L3Q13609 305 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 LY6DQ14210 128 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 KIAA0040Q15053 153 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 RBBP5Q15291 538 aaKnown RBP6.7□□□□□ -1.34
PSMB3-212ENST00000620309 NR6A1Q15406 480 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 CRTC2Q53ET0 693 aaPredicted RBP6.7□□□□□ -1.34
PSMB3-212ENST00000620309 TMEM35AQ53FP2 167 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 SPIN4Q56A73 249 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 SGO1Q5FBB7 561 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 C6orf136Q5SQH8 315 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 ARHGAP40Q5TG30 622 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 GARNL3Q5VVW2 1013 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 RHBDD2Q6NTF9 364 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 GALNT18Q6P9A2 607 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 INO80CQ6PI98 192 aaPredicted RBP6.7□□□□□ -1.34
PSMB3-212ENST00000620309 SCIMPQ6UWF3 145 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 ZNF793Q6ZN11 406 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 LARP4Q71RC2 724 aaKnown RBP eCLIP6.7□□□□□ -1.347e-8■■■■■ 35.5
PSMB3-212ENST00000620309 ABHD13Q7L211 337 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 COMMD6Q7Z4G1 85 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 UBE3DQ7Z6J8 389 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 PIGWQ7Z7B1 504 aa6.7□□□□□ -1.34
PSMB3-212ENST00000620309 VASH2Q86V25 355 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms