RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 AGAP4Q96P64 663 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 ZDHHC4Q9NPG8 344 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 IL1RAPQ9NPH3 570 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 CLN6Q9NWW5 311 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 ZNF225Q9UK10 706 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 F5P12259 2224 aa6.72□□□□□ -1.33
SRGAP3-213ENST00000618999 OR2A25A4D2G3 310 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 CLDN7O95471 211 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 PRAMEF1O95521 474 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 POU2F2P09086 479 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 KDELR2P33947 212 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 HNF1BP35680 557 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 DAPP51397 102 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 HK3P52790 923 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 POLR2LP62875 67 aaKnown RBP6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 ACSM2AQ08AH3 577 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 TSTA3Q13630 321 aaPredicted RBP6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 PDGFRLQ15198 375 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 VMACQ2NL98 169 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 SMU1Q2TAY7 513 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 ACSM2BQ68CK6 577 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 SERPINA13PQ6UXR4 307 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 USP45Q70EL2 814 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 C12orf40Q86WS4 652 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 CPA6Q8N4T0 437 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 ZBTB2Q8N680 514 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 WDR36Q8NI36 951 aaKnown RBP6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 CSGALNACT1Q8TDX6 532 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 SLC29A3Q9BZD2 475 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 CD244Q9BZW8 370 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 SLIRPQ9GZT3 109 aaKnown RBP6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 CLMPQ9H6B4 373 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 C14orf119Q9NWQ9 140 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 ABCG2Q9UNQ0 655 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 CORO2BQ9UQ03 480 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 BRWD1Q9NSI6 2320 aa6.71□□□□□ -1.33
SRGAP3-213ENST00000618999 MGAT4DA6NG13 374 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 METTL15A6NJ78 407 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 KLK8O60259 260 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 SOCS5O75159 536 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 ABCB1P08183 1280 aaPredicted RBP6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 BMP1P13497 986 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 HLA-EP13747 358 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 UGT2B10P36537 528 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 CLK3P49761 638 aaKnown RBP6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 SCAND1P57086 179 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 PRKCDQ05655 676 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 DLX2Q07687 328 aaPredicted RBP6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 RUNX3Q13761 415 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 STARD3Q14849 445 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 AAK1Q2M2I8 961 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 LRIT3Q3SXY7 679 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 UBE2UQ5VVX9 321 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 TMEM215Q68D42 235 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 GDPD4Q6W3E5 623 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 EIF3MQ7L2H7 374 aaKnown RBP6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 SNX20Q7Z614 316 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 VTCN1Q7Z7D3 282 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 SERPINA9Q86WD7 417 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 FAM83FQ8NEG4 500 aaPredicted RBP6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 OR52J3Q8NH60 311 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 C9orf43Q8TAL5 461 aaPredicted RBP6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 PIH1D2Q8WWB5 315 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 Q96MT0 163 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 MYADMQ96S97 322 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 IKZF5Q9H5V7 419 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 BRD9Q9H8M2 597 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 FARSBQ9NSD9 589 aaKnown RBP6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 MARK1Q9P0L2 795 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 TRPS1Q9UHF7 1281 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 TEKT2Q9UIF3 430 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 EDARQ9UNE0 448 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 TMEM98Q9Y2Y6 226 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 NAALAD2Q9Y3Q0 740 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 UGT2A1Q9Y4X1 527 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 ASB1Q9Y576 335 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 SLITRK5O94991 958 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 VIPP01282 170 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 IFNA14P01570 189 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 TRBC1P01850 177 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 ANXA8P13928 327 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 ITGA2P17301 1181 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 PPIBP23284 216 aaKnown RBP6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 RRM2P31350 389 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 TGFBR1P36897 503 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 CLDN8P56748 225 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 SCN1BQ07699 218 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 ABRQ12979 859 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 MRPL28Q13084 256 aaKnown RBP6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 TBCEQ15813 527 aaPredicted RBP6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 DMRTA1Q5VZB9 504 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 CEP68Q76N32 757 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 GALNT10Q86SR1 603 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 CACUL1Q86Y37 369 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 OR10G2Q8NGC3 310 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 OR52E4Q8NGH9 312 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 WFIKKN2Q8TEU8 576 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 VPS35Q96QK1 796 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 HHIPQ96QV1 700 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms