RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 SPATA9Q9BWV2 254 aa10.29□□□□□ -0.76
CLTCL1-209ENST00000617103 COPZ2Q9P299 210 aa10.29□□□□□ -0.76
CLTCL1-209ENST00000617103 B3GNT3Q9Y2A9 372 aa10.29□□□□□ -0.76
CLTCL1-209ENST00000617103 AOC2O75106 756 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 CLDN7O95471 211 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 ZNF14P17017 642 aaPredicted RBP10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 NR4A2P43354 598 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 RAB5BP61020 215 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 SNRPD2P62316 118 aaKnown RBP10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 ILF3Q12906 894 aaKnown RBP eCLIP10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 GFOD2Q3B7J2 385 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 MMAAQ8IVH4 418 aaKnown RBP10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 SLC22A15Q8IZD6 547 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 KDM1BQ8NB78 822 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 OR52E4Q8NGH9 312 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 CASTOR1Q8WTX7 329 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 GAL3ST3Q96A11 431 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 GAL3ST4Q96RP7 486 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 RANBP9Q96S59 729 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 ZNF304Q9HCX3 659 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 ABCD2Q9UBJ2 740 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 MSL3P1P0C860 447 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 TCEA1P23193 301 aaKnown RBP10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 SLC6A6P31641 620 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 ARF3P61204 181 aaPredicted RBP10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 ARF1P84077 181 aaKnown RBP10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 PTPRCAPQ14761 206 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 SLC36A3Q495N2 470 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 ANKRD54Q6NXT1 300 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 KRTCAP2Q8N6L1 136 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 PMM1Q92871 262 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 RHBDF1Q96CC6 855 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 SECISBP2Q96T21 854 aaKnown RBP10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 NANSQ9NR45 359 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 CENPMQ9NSP4 180 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 TMEM184CQ9NVA4 438 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 RABL2AQ9UBK7 228 aaPredicted RBP10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 ENPP5Q9UJA9 477 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 RABL2BQ9UNT1 228 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 SLIT2O94813 1529 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 SH3D21A4FU49 640 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 ZNF878C9JN71 531 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 SMAD9O15198 467 aaKnown RBP10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 CREBL2O60519 120 aaPredicted RBP10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 NFATC1O95644 943 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 GM2AP17900 193 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 IL12BP29460 328 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 CAP1Q01518 475 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 FAM110CQ1W6H9 321 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 UBE2UQ5VVX9 321 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 ENPP6Q6UWR7 440 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 PIWIL3Q7Z3Z3 882 aaKnown RBP10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 DEFB132Q7Z7B7 95 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 FAM124AQ86V42 546 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 SLC44A3Q8N4M1 653 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 SMPDL3AQ92484 453 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 FEVQ99581 238 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 RIOK2Q9BVS4 552 aaKnown RBP10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 SRMSQ9H3Y6 488 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 PTGDR2Q9Y5Y4 395 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 PRAMEF11O60813 436 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 SORBS2O94875 1100 aaKnown RBP10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 VNN2O95498 520 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 PLATP00750 562 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 SMPD1P17405 629 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 LAG3P18627 525 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 CTNNB1P35222 781 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 GDI2P50395 445 aaKnown RBP10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 FGFBP1Q14512 234 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 SLC35F1Q5T1Q4 408 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 DESI1Q6ICB0 168 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 PSRC1Q6PGN9 363 aaPredicted RBP10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 TPRG1Q6ZUI0 275 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 HDDC3Q8N4P3 179 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 PAPD5Q8NDF8 572 aaKnown RBP10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 OR2AP1Q8NGE2 309 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 CD300LFQ8TDQ1 290 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 GATAD2BQ8WXI9 593 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 RAB8BQ92930 207 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 OR4K3Q96R72 315 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 NELL2Q99435 816 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 HERPUD2Q9BSE4 406 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 IGFLR1Q9H665 355 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 KCNK13Q9HB14 408 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 TMEM248Q9NWD8 314 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 FARSAQ9Y285 508 aaKnown RBP10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 PADI2Q9Y2J8 665 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 ABCC6O95255 1503 aa10.28□□□□□ -0.76
CLTCL1-209ENST00000617103 EOMESO95936 686 aa10.27□□□□□ -0.76
CLTCL1-209ENST00000617103 S1PR4O95977 384 aa10.27□□□□□ -0.76
CLTCL1-209ENST00000617103 GBAP04062 536 aa10.27□□□□□ -0.76
CLTCL1-209ENST00000617103 PRKACBP22694 351 aa10.27□□□□□ -0.76
CLTCL1-209ENST00000617103 AGTR1P30556 359 aa10.27□□□□□ -0.76
CLTCL1-209ENST00000617103 UGT2B10P36537 528 aa10.27□□□□□ -0.76
CLTCL1-209ENST00000617103 SLC10A2Q12908 348 aaPredicted RBP10.27□□□□□ -0.76
CLTCL1-209ENST00000617103 KCNC3Q14003 757 aa10.27□□□□□ -0.76
CLTCL1-209ENST00000617103 LRRC32Q14392 662 aa10.27□□□□□ -0.76
CLTCL1-209ENST00000617103 LASP1Q14847 261 aaKnown RBP10.27□□□□□ -0.76
CLTCL1-209ENST00000617103 PCBP2Q15366 365 aaKnown RBP eCLIP10.27□□□□□ -0.767e-13■■■■■ 53.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms