RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 USH1CQ9Y6N9 552 aa16.61■□□□□ 0.25
TRAPPC3-209ENST00000616395 FITM1A5D6W6 292 aa16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 HSPA4LO95757 839 aa16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 MLYCDO95822 493 aa16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 S100BP04271 92 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 TFEBP19484 476 aa16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 CXCR2P25025 360 aa16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 ACADLP28330 430 aa16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 CCR7P32248 378 aa16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 SLC1A6P48664 564 aa16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 EMP2P54851 167 aa16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 CDKN2DP55273 166 aa16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 LTBQ06643 244 aa16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 FAM214AQ32MH5 1076 aa16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 ZC3H12BQ5HYM0 836 aaKnown RBP16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 PIWIL4Q7Z3Z4 852 aaKnown RBP16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 C10orf107Q8IVU9 208 aa16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 CENPLQ8N0S6 344 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 PLD6Q8N2A8 252 aaKnown RBP16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 LMNTD1Q8N9Z9 388 aa16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 NANOS1Q8WY41 292 aaKnown RBP16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 FAM136AQ96C01 138 aa16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 P2RY12Q9H244 342 aa16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 ENAMQ9NRM1 1142 aa16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 CPSF2Q9P2I0 782 aaKnown RBP16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 TSR3Q9UJK0 312 aaKnown RBP16.6■□□□□ 0.25
TRAPPC3-209ENST00000616395 SLC5A10A0PJK1 596 aa16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 HYKKA2RU49 373 aa16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 IDSB3KWA1 339 aa16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 SLCO1B7G3V0H7 640 aa16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 EIF3FO00303 357 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 LIN7AO14910 233 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 DNAJB13P59910 316 aa16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 ABCE1P61221 599 aaKnown RBP16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 HSF1Q00613 529 aa16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 FOLH1Q04609 750 aa16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 BST1Q10588 318 aa16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 ZNF460Q14592 562 aa16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 TECRLQ5HYJ1 363 aa16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 CTSL3PQ5NE16 218 aa16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 ZNF549Q6P9A3 640 aa16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 CCDC121Q6ZUS5 278 aa16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 OTOAQ7RTW8 1153 aa16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 MYO1HQ8N1T3 1032 aa16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 OR5K2Q8NHB8 316 aa16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 GPR21Q99679 349 aa16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 MECRQ9BV79 373 aa16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 HES7Q9BYE0 225 aa16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 KLHL1Q9NR64 748 aa16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 STOX2Q9P2F5 926 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 CIDEBQ9UHD4 219 aa16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 DHRS7Q9Y394 339 aa16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 SNRNP200O75643 2136 aaKnown RBP16.59■□□□□ 0.25
TRAPPC3-209ENST00000616395 ASNA1O43681 348 aa16.58■□□□□ 0.24
TRAPPC3-209ENST00000616395 FOSL1P15407 271 aa16.58■□□□□ 0.24
TRAPPC3-209ENST00000616395 VSX2P58304 361 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC3-209ENST00000616395 HSPA14Q0VDF9 509 aa16.58■□□□□ 0.24
TRAPPC3-209ENST00000616395 CEBPEQ15744 281 aa16.58■□□□□ 0.24
TRAPPC3-209ENST00000616395 WASHC2DQ5SRD0 308 aa16.58■□□□□ 0.24
TRAPPC3-209ENST00000616395 FRA10AC1Q70Z53 315 aa16.58■□□□□ 0.24
TRAPPC3-209ENST00000616395 CHERPQ8IWX8 916 aaKnown RBP16.58■□□□□ 0.24
TRAPPC3-209ENST00000616395 DMRTC2Q8IXT2 367 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC3-209ENST00000616395 C2orf73Q8N5S3 287 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC3-209ENST00000616395 LINC01555Q8NAE3 123 aa16.58■□□□□ 0.24
TRAPPC3-209ENST00000616395 NINJ1Q92982 152 aa16.58■□□□□ 0.24
TRAPPC3-209ENST00000616395 PDLIM5Q96HC4 596 aaKnown RBP16.58■□□□□ 0.24
TRAPPC3-209ENST00000616395 BIRC8Q96P09 236 aa16.58■□□□□ 0.24
TRAPPC3-209ENST00000616395 MDFIQ99750 246 aa16.58■□□□□ 0.24
TRAPPC3-209ENST00000616395 TRMOQ9BU70 441 aa16.58■□□□□ 0.24
TRAPPC3-209ENST00000616395 REPIN1Q9BWE0 567 aaKnown RBP16.58■□□□□ 0.24
TRAPPC3-209ENST00000616395 ZNF358Q9NW07 568 aa16.58■□□□□ 0.24
TRAPPC3-209ENST00000616395 RNF112Q9ULX5 631 aa16.58■□□□□ 0.24
TRAPPC3-209ENST00000616395 IGLV3-12A0A075B6K2 115 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 NKX2-6A6NCS4 301 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 FFAR3O14843 346 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 GPR42O15529 346 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 NPHS1O60500 1241 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 NIPSNAP2O75323 286 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 TSPAN12O95859 305 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 GSTM1P09488 218 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 ENO3P13929 434 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 CD1DP15813 335 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 PKLRP30613 574 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 ARFIP2P53365 341 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 GSTM4Q03013 218 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 TFF3Q07654 80 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 DMTNQ08495 405 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 PCOLCEQ15113 449 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 CES4AQ5XG92 561 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 PRMT9Q6P2P2 845 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 FIGLAQ6QHK4 219 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 PAQR3Q6TCH7 311 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 Q71RC1 249 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 ADAMTSL2Q86TH1 951 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 SIAH3Q8IW03 269 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 KIAA1191Q96A73 305 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 FRMD6Q96NE9 622 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 SIGLEC12Q96PQ1 595 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 TRIM54Q9BYV2 358 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 ZNF700Q9H0M5 742 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms