RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 PLPP5Q8NEB5 264 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 OR4F6Q8NGB9 312 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 TRPC4APQ8TEL6 797 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 CMTM7Q96FZ5 175 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 PTCHD1Q96NR3 888 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 KCNC2Q96PR1 638 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 CSF3RQ99062 836 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 NTMT1Q9BV86 223 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 ERVK-6Q9BXR3 956 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 MFRPQ9BY79 579 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 RAB21Q9UL25 225 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 ZNF451Q9Y4E5 1061 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 SVILO95425 2214 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 GLRA3O75311 464 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 SUPT7LO94864 414 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 PRR35P0CG20 571 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 JAK1P23458 1154 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 ATP5F1P24539 256 aaPredicted RBP15.72■□□□□ 0.11
CBWD3-211ENST00000615061 PIK3CBP42338 1070 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 LIM2P55344 173 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 IFFO1Q0D2I5 559 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 KLRB1Q12918 225 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 SFT2D3Q587I9 215 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 LETMD1Q6P1Q0 360 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 RBMXL3Q8N7X1 1067 aaKnown RBP15.72■□□□□ 0.11
CBWD3-211ENST00000615061 ZBTB9Q96C00 473 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 IMMP1LQ96LU5 166 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 SERINC2Q96SA4 455 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 TRIM4Q9C037 500 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 LHPPQ9H008 270 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 COPS7BQ9H9Q2 264 aaPredicted RBP15.72■□□□□ 0.11
CBWD3-211ENST00000615061 CLK4Q9HAZ1 481 aaKnown RBP15.72■□□□□ 0.11
CBWD3-211ENST00000615061 NECTIN3Q9NQS3 549 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 RIC8BQ9NVN3 520 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 LUZP4Q9P127 313 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 DAPP1Q9UN19 280 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 G3V2L1 256 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 PRMT3O60678 531 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 PROCP04070 461 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 CYC1P08574 325 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 PLA2G2AP14555 144 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 ATP5A1P25705 553 aaKnown RBP15.72■□□□□ 0.11
CBWD3-211ENST00000615061 SERPINB1P30740 379 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 HPDP32754 393 aaPredicted RBP15.72■□□□□ 0.11
CBWD3-211ENST00000615061 RAB38P57729 211 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 CLCQ05315 142 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 QSOX2Q6ZRP7 698 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 CHSY3Q70JA7 882 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 MILR1Q7Z6M3 343 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 KBTBD2Q8IY47 623 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 ACOT4Q8N9L9 421 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 BRIX1Q8TDN6 353 aaKnown RBP15.72■□□□□ 0.11
CBWD3-211ENST00000615061 PSMF1Q92530 271 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 MAPKAP1Q9BPZ7 522 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 NPLQ9BXD5 320 aaPredicted RBP15.72■□□□□ 0.11
CBWD3-211ENST00000615061 EPN3Q9H201 632 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 C19orf25Q9UFG5 118 aaPredicted RBP15.72■□□□□ 0.11
CBWD3-211ENST00000615061 PLAAQ9Y263 795 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 TSC22D4Q9Y3Q8 395 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 CSAG2Q9Y5P2 127 aa15.72■□□□□ 0.11
CBWD3-211ENST00000615061 CPAMD8Q8IZJ3 1885 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 A0A088AWK7 358 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 TGFBR3LH3BV60 316 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 PLPP1O14494 284 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 COPEO14579 308 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 PCDH17O14917 1159 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 ITGAMP11215 1152 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 IMPDH1P20839 514 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 ZNF10P21506 573 aaPredicted RBP15.71■□□□□ 0.11
CBWD3-211ENST00000615061 HIST1H1TP22492 207 aaPredicted RBP15.71■□□□□ 0.11
CBWD3-211ENST00000615061 CRHR1P34998 444 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 SSR2P43308 183 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 PRKAA2P54646 552 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 SLC18A2Q05940 514 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 TGM3Q08188 693 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 TMEM35AQ53FP2 167 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 MREGQ8N565 214 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 SIRT6Q8N6T7 355 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 PPP4R1Q8TF05 950 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 REPS1Q96D71 796 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 TBCDQ9BTW9 1192 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 TUBB6Q9BUF5 446 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 ZNF717Q9BY31 904 aaPredicted RBP15.71■□□□□ 0.11
CBWD3-211ENST00000615061 FARSBQ9NSD9 589 aaKnown RBP15.71■□□□□ 0.11
CBWD3-211ENST00000615061 KCMF1Q9P0J7 381 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 ADGRE2Q9UHX3 823 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 ANAPC2Q9UJX6 822 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 PCDHGB7Q9Y5F8 929 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 CLDN16Q9Y5I7 305 aa15.71■□□□□ 0.11
CBWD3-211ENST00000615061 IGKV3D-11A0A0A0MRZ8 115 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 CYR61O00622 381 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 PLIN3O60664 434 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 OR4F21O95013 312 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 OTCP00480 354 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 ALPPP05187 535 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 SERPINA7P05543 415 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 CCT5P48643 541 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 OR4D2P58180 307 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 AP5B1Q2VPB7 878 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 SGO1Q5FBB7 561 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms