RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 CCT8L2Q96SF2 557 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 TMEM120AQ9BXJ8 343 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 LYARQ9NX58 379 aaKnown RBP13.93□□□□□ -0.18
CD48-203ENST00000613788 MS4A12Q9NXJ0 267 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 NOP53Q9NZM5 478 aaKnown RBP13.93□□□□□ -0.18
CD48-203ENST00000613788 GIMAP2Q9UG22 337 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 TMEM184BQ9Y519 407 aaPredicted RBP13.93□□□□□ -0.18
CD48-203ENST00000613788 SPACA6W5XKT8 324 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 A0A0A6YYD5 115 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 SNX3O60493 162 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 RDH16O75452 317 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 DXOO77932 396 aaKnown RBP13.92□□□□□ -0.18
CD48-203ENST00000613788 FAM107AO95990 144 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 GBAP04062 536 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 FAM58BPP0C7Q3 252 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 CCNYL3P0C7X3 344 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 PRPS2P11908 318 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 CERS1P27544 350 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 CD82P27701 267 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 RORAP35398 523 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 MAPK12P53778 367 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 TRA2BP62995 288 aaKnown RBP13.92□□□□□ -0.18
CD48-203ENST00000613788 SNRPNP63162 240 aaKnown RBP13.92□□□□□ -0.18
CD48-203ENST00000613788 RAE1P78406 368 aaKnown RBP13.92□□□□□ -0.18
CD48-203ENST00000613788 SF3A3Q12874 501 aaKnown RBP eCLIP13.92□□□□□ -0.18
CD48-203ENST00000613788 DSG2Q14126 1118 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 IL23RQ5VWK5 629 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 METTL21CQ5VZV1 264 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 FAM9CQ8IZT9 166 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 DSELQ8IZU8 1212 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 SCNM1Q9BWG6 230 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 LYRM4Q9HD34 91 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 ASIC5Q9NY37 505 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 KLK13Q9UKR3 277 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 TRIM33Q9UPN9 1127 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 WBP11Q9Y2W2 641 aaKnown RBP13.92□□□□□ -0.18
CD48-203ENST00000613788 POLR3HQ9Y535 204 aaPredicted RBP13.92□□□□□ -0.18
CD48-203ENST00000613788 AK5Q9Y6K8 562 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 MAU2Q9Y6X3 613 aa13.92□□□□□ -0.18
CD48-203ENST00000613788 PTPRBP23467 1997 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 TRABD2BA6NFA1 517 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 ZNF860A6NHJ4 632 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 UBDO15205 165 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 ONECUT2O95948 504 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 FBLP22087 321 aaKnown RBP13.91□□□□□ -0.18
CD48-203ENST00000613788 SLC5A2P31639 672 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 OR1D4P47884 311 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 RUNX2Q13950 521 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 COL9A2Q14055 689 aaPredicted RBP13.91□□□□□ -0.18
CD48-203ENST00000613788 NKAIN1Q4KMZ8 207 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 ARHGAP40Q5TG30 622 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 MRM1Q6IN84 353 aaKnown RBP13.91□□□□□ -0.18
CD48-203ENST00000613788 C6orf15Q6UXA7 325 aaPredicted RBP13.91□□□□□ -0.18
CD48-203ENST00000613788 PIGWQ7Z7B1 504 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 GPR180Q86V85 440 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 DTWD1Q8N5C7 304 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 METTL27Q8N6F8 245 aaPredicted RBP13.91□□□□□ -0.18
CD48-203ENST00000613788 AMER3Q8N944 861 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 NXPE2Q96DL1 559 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 C1orf50Q9BV19 199 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 SPRY4Q9C004 299 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 RABEP2Q9H5N1 569 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 THSD1Q9NS62 852 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 FOXJ2Q9P0K8 574 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 PHF11Q9UIL8 331 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 PADI1Q9ULC6 663 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 DAPP1Q9UN19 280 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 MAP4K5Q9Y4K4 846 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 NEUROG3Q9Y4Z2 214 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 KIF26BQ2KJY2 2108 aa13.91□□□□□ -0.18
CD48-203ENST00000613788 CDRT15L2A8MXV6 281 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 PSMD12O00232 456 aaPredicted RBP13.9□□□□□ -0.18
CD48-203ENST00000613788 CHST10O43529 356 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 TMPRSS11DO60235 418 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 DLGAP3O95886 979 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 BCKDHAP12694 445 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 RNH1P13489 461 aaKnown RBP13.9□□□□□ -0.18
CD48-203ENST00000613788 IL10P22301 178 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 LIM2P55344 173 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 IRX1P78414 480 aaPredicted RBP13.9□□□□□ -0.18
CD48-203ENST00000613788 ZNF763Q0D2J5 394 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 MAP7Q14244 749 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 RPS6KA2Q15349 733 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 ZNF385CQ66K41 422 aaPredicted RBP13.9□□□□□ -0.18
CD48-203ENST00000613788 CA13Q8N1Q1 262 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 ESX1Q8N693 406 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 GALNT6Q8NCL4 622 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 ADAMTS18Q8TE60 1221 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 C16orf78Q8WTQ4 265 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 C10orf82Q8WW14 230 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 MR1Q95460 341 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 RNF31Q96EP0 1072 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 MAPKAP1Q9BPZ7 522 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 YIPF2Q9BWQ6 316 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 EBPLQ9BY08 206 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 IFT80Q9P2H3 777 aaPredicted RBP13.9□□□□□ -0.18
CD48-203ENST00000613788 FBXW2Q9UKT8 454 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 WASF3Q9UPY6 502 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 DLGAP4Q9Y2H0 992 aa13.9□□□□□ -0.18
CD48-203ENST00000613788 ASB4Q9Y574 426 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms