RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 TMEM17Q86X19 198 aa8.4□□□□□ -1.07
PDE6A-204ENST00000613228 PLCZ1Q86YW0 608 aa8.4□□□□□ -1.07
PDE6A-204ENST00000613228 ZDHHC21Q8IVQ6 265 aa8.4□□□□□ -1.07
PDE6A-204ENST00000613228 NPAS3Q8IXF0 933 aa8.4□□□□□ -1.07
PDE6A-204ENST00000613228 OR13J1Q8NGT2 312 aa8.4□□□□□ -1.07
PDE6A-204ENST00000613228 OR8K5Q8NH50 307 aa8.4□□□□□ -1.07
PDE6A-204ENST00000613228 SHKBP1Q8TBC3 707 aa8.4□□□□□ -1.07
PDE6A-204ENST00000613228 EXOSC8Q96B26 276 aaKnown RBP8.4□□□□□ -1.07
PDE6A-204ENST00000613228 SSX3Q99909 188 aa8.4□□□□□ -1.07
PDE6A-204ENST00000613228 MIR1-1HGQ9H1L0 117 aa8.4□□□□□ -1.07
PDE6A-204ENST00000613228 CXCL16Q9H2A7 254 aa8.4□□□□□ -1.07
PDE6A-204ENST00000613228 REEP4Q9H6H4 257 aa8.4□□□□□ -1.07
PDE6A-204ENST00000613228 C12orf10Q9HB07 376 aa8.4□□□□□ -1.07
PDE6A-204ENST00000613228 ADAMTS6Q9UKP5 1117 aa8.4□□□□□ -1.07
PDE6A-204ENST00000613228 KDM4BO94953 1096 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 OR5F1O95221 314 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 ATXN8OSP0DMR3 200 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 G6PDP11413 515 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 SLC5A2P31639 672 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 RFX3P48380 749 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 MVKQ03426 396 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 CBLBQ13191 982 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 INAVAQ3KP66 663 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 USP39Q53GS9 565 aaKnown RBP8.39□□□□□ -1.07
PDE6A-204ENST00000613228 IRAK1BP1Q5VVH5 260 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 NOXA1Q86UR1 476 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 DPP10Q8N608 796 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 C1orf52Q8N6N3 182 aaKnown RBP8.39□□□□□ -1.07
PDE6A-204ENST00000613228 PIGXQ8TBF5 258 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 SLC38A4Q969I6 547 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 WDR92Q96MX6 357 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 SNX18Q96RF0 628 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 PKMYT1Q99640 499 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 SLITRK2Q9H156 845 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 RAB23Q9ULC3 237 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 LOC285556D6RIA3 1793 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.39□□□□□ -1.07
PDE6A-204ENST00000613228 METTL21EPA6NDL7 271 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 CLIC1O00299 241 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 CAPN5O15484 640 aaPredicted RBP8.39□□□□□ -1.07
PDE6A-204ENST00000613228 RNGTTO60942 597 aaKnown RBP8.39□□□□□ -1.07
PDE6A-204ENST00000613228 NTSR1P30989 418 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 TGFBR2P37173 567 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 GSK3BP49841 420 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 AFF1P51825 1210 aaKnown RBP8.39□□□□□ -1.07
PDE6A-204ENST00000613228 SLC16A1P53985 500 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 ARF5P84085 180 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 FADDQ13158 208 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 DAG1Q14118 895 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 SF3B4Q15427 424 aaKnown RBP eCLIP8.39□□□□□ -1.07
PDE6A-204ENST00000613228 CST6Q15828 149 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 ZNF404Q494X3 552 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 ESCO2Q56NI9 601 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 FOXB2Q5VYV0 432 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 Q6ZVL8 140 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 MZB1Q8WU39 189 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 SLC35A5Q9BS91 424 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 RANBP3Q9H6Z4 567 aaPredicted RBP8.39□□□□□ -1.07
PDE6A-204ENST00000613228 MS4A12Q9NXJ0 267 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 EIF3KQ9UBQ5 218 aaKnown RBP8.39□□□□□ -1.07
PDE6A-204ENST00000613228 CHST10O43529 356 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 PSIP1O75475 530 aaKnown RBP8.39□□□□□ -1.07
PDE6A-204ENST00000613228 PAHP00439 452 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 C6P13671 934 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 ENGP17813 658 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 BMP7P18075 431 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 GSTM3P21266 225 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 CAPZA2P47755 286 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 CLCNKAP51800 687 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 PPP5CP53041 499 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 C1QTNF8P60827 252 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 RPP38P78345 283 aaKnown RBP8.39□□□□□ -1.07
PDE6A-204ENST00000613228 STX4Q12846 297 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 PTPRCAPQ14761 206 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 ARHGAP19Q14CB8 494 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 HNRNPA1L2Q32P51 320 aaKnown RBP8.39□□□□□ -1.07
PDE6A-204ENST00000613228 HSF5Q4G112 596 aaPredicted RBP8.39□□□□□ -1.07
PDE6A-204ENST00000613228 LRRC73Q5JTD7 316 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 TMEM25Q86YD3 366 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 OR5P2Q8WZ92 322 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 PYURFQ96I23 114 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 ART5Q96L15 291 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 ALPK1Q96QP1 1244 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 PSD2Q9BQI7 771 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 GSTO2Q9H4Y5 243 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 EMCNQ9ULC0 261 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 FZD4Q9ULV1 537 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 MAP4K5Q9Y4K4 846 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 AP1G1O43747 822 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 KLF8O95600 359 aaPredicted RBP8.39□□□□□ -1.07
PDE6A-204ENST00000613228 ALPPP05187 535 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 HSD17B1P14061 328 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 CEBPBP17676 345 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 CD247P20963 164 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 CD79BP40259 229 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 ZNF155Q12901 538 aaPredicted RBP8.39□□□□□ -1.07
PDE6A-204ENST00000613228 ATP6AP1Q15904 470 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 GGTA1PQ4G0N0 100 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 CCBE1Q6UXH8 406 aaPredicted RBP8.39□□□□□ -1.07
PDE6A-204ENST00000613228 COL26A1Q96A83 441 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms