RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 LINGO4Q6UY18 593 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 UBE2R2Q712K3 238 aaPredicted RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 OR4Q3Q8NH05 313 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 DNASE1L2Q92874 299 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 ZDHHC5Q9C0B5 715 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.48□□□□□ -1.05
TTC28-208ENST00000612946 OR52A5Q9H2C5 316 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 SLAMF7Q9NQ25 335 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 HBE1P02100 147 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 ITPKAP23677 461 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 HSD3B2P26439 372 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 CAMK2DQ13557 499 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 STK11Q15831 433 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 LIPKQ5VXJ0 399 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 MFSD6LQ8IWD5 586 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 YIPF7Q8N8F6 280 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 MINDY3Q9H8M7 445 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 ERVK-18Q9QC07 812 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 NOCTQ9UK39 431 aaKnown RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 LAMB1P07942 1786 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 A0A1W2PQL4 384 aaPredicted RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 UGT2B7P16662 529 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 TAF1AQ15573 450 aaPredicted RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 DPYSL2Q16555 572 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 UBE2NLQ5JXB2 153 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 GRAMD2AQ8IUY3 354 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 CARS2Q9HA77 564 aaKnown RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 OR6C6A6NF89 314 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 SMIM6P0DI80 62 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 HSPA7P48741 367 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 TAS2R20P59543 309 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 UGT8Q16880 541 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 CNIH2Q6PI25 160 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 C2orf69Q8N8R5 385 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 FAM156AQ8NDB6 213 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 PIGBQ92521 554 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 KLHL15Q96M94 604 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 OR11A1Q9GZK7 315 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 EVA1AQ9H8M9 152 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 PLEKHM1Q9Y4G2 1056 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 SCN3AQ9NY46 2000 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 N4BP2Q86UW6 1770 aaPredicted RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 TCRBV5S4A2TA0A5A2 114 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 ZNF705FA8MVS1 300 aaPredicted RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 B4GALT4O60513 344 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 ZNF705DP0CH99 300 aaPredicted RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 ZNF705BP0CI00 300 aaPredicted RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 RAB30Q15771 203 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 CD276Q5ZPR3 534 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 METTL2BQ6P1Q9 378 aaKnown RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 ZNF527Q8NB42 609 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 RSPRY1Q96DX4 576 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 MTIF3Q9H2K0 278 aaKnown RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 ERVMER34-1Q9H9K5 563 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 APMAPQ9HDC9 416 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 MAFFQ9ULX9 164 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 LOC285095A0A1B0GVY8 99 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 A0A1W2PS29 197 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 HEXBP07686 556 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 OXTRP30559 389 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 RPS19P39019 145 aaKnown RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 MRPS5P82675 430 aaKnown RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 OXA1LQ15070 435 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 SIGIRRQ6IA17 410 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 PGBD3Q8N328 593 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 SLC25A32Q9H2D1 315 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 AGO3Q9H9G7 860 aaKnown RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 TPT1P8Q9HAU6 139 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 CTPS2Q9NRF8 586 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 ERVK13-1Q9NX77 482 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 INTS6Q9UL03 887 aaKnown RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 ROBO2Q9HCK4 1378 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 ZNF705GA8MUZ8 300 aaPredicted RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 ARVCFO00192 962 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 FKTNO75072 461 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 FRKP42685 505 aaPredicted RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 NDST2P52849 883 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 YBEYP58557 167 aaPredicted RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 UBAP2Q5T6F2 1119 aaKnown RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 CACUL1Q86Y37 369 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 PRMT6Q96LA8 375 aaPredicted RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 DERL2Q9GZP9 239 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 DICER1Q9UPY3 1922 aaKnown RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 C17orf102A2RUQ5 167 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 MSI1O43347 362 aaKnown RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 LRCH4O75427 683 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 TP53P04637 393 aaPredicted RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 ZNF823P16415 610 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 MTFR2Q6P444 385 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 CLRN3Q8NCR9 226 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 PYCR2Q96C36 320 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 METTL2AQ96IZ6 378 aaKnown RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 ATP13A2Q9NQ11 1180 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 ACSL6Q9UKU0 697 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 MED31Q9Y3C7 131 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 SLC22A31A6NKX4 558 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 SCGB2A1O75556 95 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 LRG1P02750 347 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 HCAR3P49019 387 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 PPM1JQ5JR12 505 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms