RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 HYKKA2RU49 373 aa16.64■□□□□ 0.25
SREK1-216ENST00000612404 B3GALT2O43825 422 aa16.64■□□□□ 0.25
SREK1-216ENST00000612404 S100A3P33764 101 aa16.64■□□□□ 0.25
SREK1-216ENST00000612404 ALDH9A1P49189 494 aa16.64■□□□□ 0.25
SREK1-216ENST00000612404 NDUFA9Q16795 377 aa16.64■□□□□ 0.25
SREK1-216ENST00000612404 UGT8Q16880 541 aa16.64■□□□□ 0.25
SREK1-216ENST00000612404 IKBIPQ70UQ0 350 aa16.64■□□□□ 0.25
SREK1-216ENST00000612404 B3GNT8Q7Z7M8 397 aa16.64■□□□□ 0.25
SREK1-216ENST00000612404 GPR135Q8IZ08 494 aa16.64■□□□□ 0.25
SREK1-216ENST00000612404 MMP21Q8N119 569 aa16.64■□□□□ 0.25
SREK1-216ENST00000612404 OR1L3Q8NH93 324 aa16.64■□□□□ 0.25
SREK1-216ENST00000612404 TSPEARQ8WU66 669 aa16.64■□□□□ 0.25
SREK1-216ENST00000612404 SLC7A6OSQ96CW6 309 aaPredicted RBP16.64■□□□□ 0.25
SREK1-216ENST00000612404 SERINC2Q96SA4 455 aa16.64■□□□□ 0.25
SREK1-216ENST00000612404 PRPF18Q99633 342 aaKnown RBP16.64■□□□□ 0.25
SREK1-216ENST00000612404 REEP4Q9H6H4 257 aa16.64■□□□□ 0.25
SREK1-216ENST00000612404 EFCAB1Q9HAE3 211 aa16.64■□□□□ 0.25
SREK1-216ENST00000612404 ANKHQ9HCJ1 492 aa16.64■□□□□ 0.25
SREK1-216ENST00000612404 SLC52A3Q9NQ40 469 aa16.64■□□□□ 0.25
SREK1-216ENST00000612404 MIEF1Q9NQG6 463 aa16.64■□□□□ 0.25
SREK1-216ENST00000612404 TEX10Q9NXF1 929 aaPredicted RBP16.64■□□□□ 0.25
SREK1-216ENST00000612404 SH3BP4Q9P0V3 963 aa16.64■□□□□ 0.25
SREK1-216ENST00000612404 SERTAD3Q9UJW9 196 aa16.64■□□□□ 0.25
SREK1-216ENST00000612404 MAPRE3Q9UPY8 281 aa16.64■□□□□ 0.25
SREK1-216ENST00000612404 GABRR3A8MPY1 467 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 BBIP1A8MTZ0 92 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 ANKRD65E5RJM6 399 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 CFLARO15519 480 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 PGRP06401 933 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 C21orf58P58505 322 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 TRA2BP62995 288 aaKnown RBP16.63■□□□□ 0.25
SREK1-216ENST00000612404 KLC1Q07866 573 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 ART3Q13508 389 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 GRM7Q14831 915 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 PDSS2Q86YH6 399 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 EFCAB3Q8N7B9 438 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 TTC29Q8NA56 475 aaPredicted RBP16.63■□□□□ 0.25
SREK1-216ENST00000612404 RBM15BQ8NDT2 890 aaKnown RBP16.63■□□□□ 0.25
SREK1-216ENST00000612404 OR52E6Q96RD3 313 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 EXO1Q9UQ84 846 aaKnown RBP16.63■□□□□ 0.25
SREK1-216ENST00000612404 WBP11Q9Y2W2 641 aaKnown RBP16.63■□□□□ 0.25
SREK1-216ENST00000612404 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.63■□□□□ 0.25
SREK1-216ENST00000612404 DYTNA2CJ06 578 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 MRASO14807 208 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 GALR3O60755 368 aaPredicted RBP16.63■□□□□ 0.25
SREK1-216ENST00000612404 GUCY1B2O75343 617 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 SCELO95171 688 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 MSL3P1P0C860 447 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 KIR3DL1P43629 444 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 GSTM5P46439 218 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 HNRNPH2P55795 449 aaKnown RBP16.63■□□□□ 0.25
SREK1-216ENST00000612404 ITGA1P56199 1179 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 OLR1P78380 273 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 SRSF11Q05519 484 aaKnown RBP16.63■□□□□ 0.25
SREK1-216ENST00000612404 FOXM1Q08050 763 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 HEPACAMQ14CZ8 416 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 DPY19L1Q2PZI1 675 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 CPTPQ5TA50 214 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 NDUFAF5Q5TEU4 345 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 R3HCC1LQ7Z5L2 792 aaKnown RBP16.63■□□□□ 0.25
SREK1-216ENST00000612404 GPR180Q86V85 440 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 ARHGEF39Q8N4T4 335 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 OR9A4Q8NGU2 314 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 C10orf90Q96M02 699 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 PHOX2BQ99453 314 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 LYARQ9NX58 379 aaKnown RBP16.63■□□□□ 0.25
SREK1-216ENST00000612404 ATG4BQ9Y4P1 393 aa16.63■□□□□ 0.25
SREK1-216ENST00000612404 A0A0A6YYC8 382 aaPredicted RBP16.62■□□□□ 0.25
SREK1-216ENST00000612404 ASPDHA6ND91 283 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 I3L1I5 382 aaPredicted RBP16.62■□□□□ 0.25
SREK1-216ENST00000612404 SGK494L7N484 410 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 GYG2O15488 501 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 RFPL3O75679 317 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 SLC34A2O95436 690 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 FURINP09958 794 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 PIM1P11309 404 aaPredicted RBP16.62■□□□□ 0.25
SREK1-216ENST00000612404 PTPN4P29074 926 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 CSTF2P33240 577 aaKnown RBP eCLIP16.62■□□□□ 0.254e-7■■■■■ 27.2
SREK1-216ENST00000612404 RPL3P39023 403 aaKnown RBP16.62■□□□□ 0.25
SREK1-216ENST00000612404 SLC25A3Q00325 362 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 PLIN5Q00G26 463 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 ACY1Q03154 408 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 SLC2A7Q6PXP3 512 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 RETREG3Q86VR2 466 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 DTWD1Q8N5C7 304 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 PCYOX1LQ8NBM8 494 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 PPCDCQ96CD2 204 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 KLHL29Q96CT2 875 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 ZNF501Q96CX3 271 aaPredicted RBP16.62■□□□□ 0.25
SREK1-216ENST00000612404 OR6C1Q96RD1 312 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 MAPKAP1Q9BPZ7 522 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 BTBD10Q9BSF8 475 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 FAIM2Q9BWQ8 316 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 IL1RL2Q9HB29 575 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 TAS2R1Q9NYW7 299 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 LEF1Q9UJU2 399 aaPredicted RBP16.62■□□□□ 0.25
SREK1-216ENST00000612404 ASB4Q9Y574 426 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 ADAMTS20P59510 1910 aa16.62■□□□□ 0.25
SREK1-216ENST00000612404 CROCCQ5TZA2 2017 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 FITM1A5D6W6 292 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms