RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 COPS7BQ9H9Q2 264 aaPredicted RBP17.07■□□□□ 0.32
VCX3A-203ENST00000612369 SNX15Q9NRS6 342 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 DMGDHQ9UI17 866 aaKnown RBP17.07■□□□□ 0.32
VCX3A-203ENST00000612369 HMX2A2RU54 273 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 UBXN8O00124 270 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 KLHL2O95198 593 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 EPB42P16452 691 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 CD22P20273 847 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 MAOAP21397 527 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 TYK2P29597 1187 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 GMPRP36959 345 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 SERPINB8P50452 374 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 PLA2G16P53816 162 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 TUBA3CQ13748 450 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 BMPR2Q13873 1038 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 UAP1Q16222 522 aaPredicted RBP17.06■□□□□ 0.32
VCX3A-203ENST00000612369 ZNF766Q5HY98 468 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 FCRLBQ6BAA4 426 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 KLC3Q6P597 504 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 TUBA3EQ6PEY2 450 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 RPS19BP1Q86WX3 136 aaKnown RBP17.06■□□□□ 0.32
VCX3A-203ENST00000612369 SCUBE1Q8IWY4 988 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 LAS2Q8IYD9 372 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 HORMAD2Q8N7B1 307 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 KCTD4Q8WVF5 259 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 MRRFQ96E11 262 aaKnown RBP17.06■□□□□ 0.32
VCX3A-203ENST00000612369 KCNC2Q96PR1 638 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 NPAS2Q99743 824 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 NECTIN3Q9NQS3 549 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 PRTFDC1Q9NRG1 225 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 ADGRE2Q9UHX3 823 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 ASB1Q9Y576 335 aa17.06■□□□□ 0.32
VCX3A-203ENST00000612369 A0A096LPK6 155 aa17.05■□□□□ 0.32
VCX3A-203ENST00000612369 A0A0G2JN53 185 aa17.05■□□□□ 0.32
VCX3A-203ENST00000612369 LDLRP01130 860 aa17.05■□□□□ 0.32
VCX3A-203ENST00000612369 MTHFD2P13995 350 aa17.05■□□□□ 0.32
VCX3A-203ENST00000612369 CD96P40200 585 aa17.05■□□□□ 0.32
VCX3A-203ENST00000612369 MSH2P43246 934 aa17.05■□□□□ 0.32
VCX3A-203ENST00000612369 TDGF1P3P51864 188 aa17.05■□□□□ 0.32
VCX3A-203ENST00000612369 NAA30Q147X3 362 aaPredicted RBP17.05■□□□□ 0.32
VCX3A-203ENST00000612369 C4orf17Q53FE4 359 aa17.05■□□□□ 0.32
VCX3A-203ENST00000612369 TMEM35AQ53FP2 167 aa17.05■□□□□ 0.32
VCX3A-203ENST00000612369 MED27Q6P2C8 311 aa17.05■□□□□ 0.32
VCX3A-203ENST00000612369 CHSY3Q70JA7 882 aa17.05■□□□□ 0.32
VCX3A-203ENST00000612369 NOA1Q8NC60 698 aaKnown RBP17.05■□□□□ 0.32
VCX3A-203ENST00000612369 MDS2Q8NDY4 140 aa17.05■□□□□ 0.32
VCX3A-203ENST00000612369 NFAM1Q8NET5 270 aaPredicted RBP17.05■□□□□ 0.32
VCX3A-203ENST00000612369 ZNF473Q8WTR7 871 aaKnown RBP17.05■□□□□ 0.32
VCX3A-203ENST00000612369 FMO2Q99518 471 aa17.05■□□□□ 0.32
VCX3A-203ENST00000612369 TBCDQ9BTW9 1192 aa17.05■□□□□ 0.32
VCX3A-203ENST00000612369 MS4A8Q9BY19 250 aa17.05■□□□□ 0.32
VCX3A-203ENST00000612369 CDC42EP4Q9H3Q1 356 aaKnown RBP17.05■□□□□ 0.32
VCX3A-203ENST00000612369 CDCP1Q9H5V8 836 aa17.05■□□□□ 0.32
VCX3A-203ENST00000612369 PRDM7Q9NQW5 492 aa17.05■□□□□ 0.32
VCX3A-203ENST00000612369 PLEKHB1Q9UF11 243 aaPredicted RBP17.05■□□□□ 0.32
VCX3A-203ENST00000612369 DAPP1Q9UN19 280 aa17.05■□□□□ 0.32
VCX3A-203ENST00000612369 ICE1Q9Y2F5 2266 aa17.05■□□□□ 0.32
VCX3A-203ENST00000612369 SVILO95425 2214 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 GABRR3A8MPY1 467 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 KLK8O60259 260 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 ALDOAP04075 364 aaKnown RBP17.04■□□□□ 0.32
VCX3A-203ENST00000612369 INHBAP08476 426 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 CD46P15529 392 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 SERPINB9P50453 376 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 ALDH18A1P54886 795 aaKnown RBP17.04■□□□□ 0.32
VCX3A-203ENST00000612369 LIM2P55344 173 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 IRF9Q00978 393 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 SETDB1Q15047 1291 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 ADNP2Q6IQ32 1131 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 GRHL2Q6ISB3 625 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 METTL2BQ6P1Q9 378 aaKnown RBP17.04■□□□□ 0.32
VCX3A-203ENST00000612369 ARMC10Q8N2F6 343 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 TMEM178AQ8NBL3 297 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 C7orf57Q8NEG2 295 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 B3GNT7Q8NFL0 401 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 SLC44A1Q8WWI5 657 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 IFT81Q8WYA0 676 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 SCMH1Q96GD3 660 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 F2RL3Q96RI0 385 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 LYRM4Q9HD34 91 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 PPIEQ9UNP9 301 aaKnown RBP17.04■□□□□ 0.32
VCX3A-203ENST00000612369 TSC22D4Q9Y3Q8 395 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 ANGPTL3Q9Y5C1 460 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 TNPO3Q9Y5L0 923 aaKnown RBP17.04■□□□□ 0.32
VCX3A-203ENST00000612369 IKBKGQ9Y6K9 419 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 DOPEY1Q5JWR5 2465 aa17.04■□□□□ 0.32
VCX3A-203ENST00000612369 MAST4O15021 2626 aa17.03■□□□□ 0.32
VCX3A-203ENST00000612369 ZGRF1Q86YA3 2104 aa17.03■□□□□ 0.32
VCX3A-203ENST00000612369 UTP20O75691 2785 aaKnown RBP17.03■□□□□ 0.32
VCX3A-203ENST00000612369 CYR61O00622 381 aa17.03■□□□□ 0.32
VCX3A-203ENST00000612369 GFAPP14136 432 aa17.03■□□□□ 0.32
VCX3A-203ENST00000612369 CERS1P27544 350 aa17.03■□□□□ 0.32
VCX3A-203ENST00000612369 CLCN2P51788 898 aa17.03■□□□□ 0.32
VCX3A-203ENST00000612369 PER3P56645 1201 aa17.03■□□□□ 0.32
VCX3A-203ENST00000612369 SLC13A2Q13183 592 aa17.03■□□□□ 0.32
VCX3A-203ENST00000612369 PCBP2Q15366 365 aaKnown RBP eCLIP17.03■□□□□ 0.32
VCX3A-203ENST00000612369 OR1C1Q15619 314 aa17.03■□□□□ 0.32
VCX3A-203ENST00000612369 LIPJQ5W064 366 aa17.03■□□□□ 0.32
VCX3A-203ENST00000612369 TAOK1Q7L7X3 1001 aa17.03■□□□□ 0.32
VCX3A-203ENST00000612369 TEX9Q8N6V9 391 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms