RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 PRTFDC1Q9NRG1 225 aa16.58■□□□□ 0.24
SSBP1-215ENST00000612337 PNO1Q9NRX1 252 aaKnown RBP16.58■□□□□ 0.24
SSBP1-215ENST00000612337 GPRC5BQ9NZH0 403 aa16.58■□□□□ 0.24
SSBP1-215ENST00000612337 FBXW2Q9UKT8 454 aa16.58■□□□□ 0.24
SSBP1-215ENST00000612337 CLDN16Q9Y5I7 305 aa16.58■□□□□ 0.24
SSBP1-215ENST00000612337 A0A088AWK7 358 aa16.57■□□□□ 0.24
SSBP1-215ENST00000612337 A0A0G2JN53 185 aa16.57■□□□□ 0.24
SSBP1-215ENST00000612337 SYNDIG1LA6NDD5 238 aa16.57■□□□□ 0.24
SSBP1-215ENST00000612337 C19orf84I3L1E1 186 aa16.57■□□□□ 0.24
SSBP1-215ENST00000612337 CLDN4O14493 209 aa16.57■□□□□ 0.24
SSBP1-215ENST00000612337 ADAM10O14672 748 aa16.57■□□□□ 0.24
SSBP1-215ENST00000612337 TFECO14948 347 aaPredicted RBP16.57■□□□□ 0.24
SSBP1-215ENST00000612337 B3GALT2O43825 422 aa16.57■□□□□ 0.24
SSBP1-215ENST00000612337 ITGA10O75578 1167 aa16.57■□□□□ 0.24
SSBP1-215ENST00000612337 CLEC3AO75596 197 aa16.57■□□□□ 0.24
SSBP1-215ENST00000612337 ZNF10P21506 573 aaPredicted RBP16.57■□□□□ 0.24
SSBP1-215ENST00000612337 HPDP32754 393 aaPredicted RBP16.57■□□□□ 0.24
SSBP1-215ENST00000612337 PTGER1P34995 402 aa16.57■□□□□ 0.24
SSBP1-215ENST00000612337 GPR143P51810 404 aa16.57■□□□□ 0.24
SSBP1-215ENST00000612337 RAB38P57729 211 aa16.57■□□□□ 0.24
SSBP1-215ENST00000612337 TGFBIQ15582 683 aa16.57■□□□□ 0.24
SSBP1-215ENST00000612337 ADPRMQ3LIE5 342 aa16.57■□□□□ 0.24
SSBP1-215ENST00000612337 NCCRP1Q6ZVX7 275 aaPredicted RBP16.57■□□□□ 0.24
SSBP1-215ENST00000612337 TCAIMQ8N3R3 496 aa16.57■□□□□ 0.24
SSBP1-215ENST00000612337 TMEM156Q8N614 296 aa16.57■□□□□ 0.24
SSBP1-215ENST00000612337 C16orf52Q8NHV5 167 aa16.57■□□□□ 0.24
SSBP1-215ENST00000612337 CCT6BQ92526 530 aa16.57■□□□□ 0.24
SSBP1-215ENST00000612337 NCLNQ969V3 563 aa16.57■□□□□ 0.24
SSBP1-215ENST00000612337 QRFPRQ96P65 431 aa16.57■□□□□ 0.24
SSBP1-215ENST00000612337 TRIM31Q9BZY9 425 aa16.57■□□□□ 0.24
SSBP1-215ENST00000612337 EHD1Q9H4M9 534 aa16.57■□□□□ 0.24
SSBP1-215ENST00000612337 ZNF223Q9UK11 482 aaPredicted RBP16.57■□□□□ 0.24
SSBP1-215ENST00000612337 MRPS33Q9Y291 106 aaKnown RBP16.57■□□□□ 0.24
SSBP1-215ENST00000612337 NCF1BA6NI72 391 aaPredicted RBP16.56■□□□□ 0.24
SSBP1-215ENST00000612337 NCF1CA8MVU1 366 aaPredicted RBP16.56■□□□□ 0.24
SSBP1-215ENST00000612337 TGFBR3LH3BV60 316 aa16.56■□□□□ 0.24
SSBP1-215ENST00000612337 CCDC188H7C350 402 aa16.56■□□□□ 0.24
SSBP1-215ENST00000612337 PEX1O43933 1283 aa16.56■□□□□ 0.24
SSBP1-215ENST00000612337 WISP3O95389 354 aaPredicted RBP16.56■□□□□ 0.24
SSBP1-215ENST00000612337 TBX6O95947 436 aaPredicted RBP16.56■□□□□ 0.24
SSBP1-215ENST00000612337 NCF1P14598 390 aaPredicted RBP16.56■□□□□ 0.24
SSBP1-215ENST00000612337 TFEBP19484 476 aa16.56■□□□□ 0.24
SSBP1-215ENST00000612337 GGT5P36269 586 aa16.56■□□□□ 0.24
SSBP1-215ENST00000612337 HNRNPFP52597 415 aaKnown RBP16.56■□□□□ 0.24
SSBP1-215ENST00000612337 SLC12A2P55011 1212 aa16.56■□□□□ 0.24
SSBP1-215ENST00000612337 POU4F1Q01851 419 aa16.56■□□□□ 0.24
SSBP1-215ENST00000612337 SLC13A2Q13183 592 aa16.56■□□□□ 0.24
SSBP1-215ENST00000612337 ZNF595Q8IYB9 648 aa16.56■□□□□ 0.24
SSBP1-215ENST00000612337 ZBED8Q8IZ13 594 aa16.56■□□□□ 0.24
SSBP1-215ENST00000612337 ZNF295-AS1Q8N0V1 137 aa16.56■□□□□ 0.24
SSBP1-215ENST00000612337 ZFP62Q8NB50 900 aaPredicted RBP16.56■□□□□ 0.24
SSBP1-215ENST00000612337 TMEM52Q8NDY8 209 aa16.56■□□□□ 0.24
SSBP1-215ENST00000612337 OR2L5Q8NG80 312 aa16.56■□□□□ 0.24
SSBP1-215ENST00000612337 CCDC77Q9BR77 488 aa16.56■□□□□ 0.24
SSBP1-215ENST00000612337 REXO4Q9GZR2 422 aaKnown RBP16.56■□□□□ 0.24
SSBP1-215ENST00000612337 CNOT10Q9H9A5 744 aaKnown RBP16.56■□□□□ 0.24
SSBP1-215ENST00000612337 ADAP2Q9NPF8 381 aa16.56■□□□□ 0.24
SSBP1-215ENST00000612337 SMYD2Q9NRG4 433 aa16.56■□□□□ 0.24
SSBP1-215ENST00000612337 SAR1BQ9Y6B6 198 aa16.56■□□□□ 0.24
SSBP1-215ENST00000612337 F8P00451 2351 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 ANKDD1BA6NHY2 528 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 EFCAB8A8MWE9 144 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 TAPBPO15533 448 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 ZFAND5O76080 213 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 POU3F2P20265 443 aaPredicted RBP16.55■□□□□ 0.24
SSBP1-215ENST00000612337 PPP2R1BP30154 601 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 SSTR2P30874 369 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 PTGS2P35354 604 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 RFC3P40938 356 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 KIR3DL1P43629 444 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 SSR4P51571 173 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 PLA2G16P53816 162 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 CDKL4Q5MAI5 379 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 TRIM40Q6P9F5 258 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 ABHD17CQ6PCB6 329 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 C3P1Q6ZMU1 363 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 MDGA2Q7Z553 956 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 VN1R5Q7Z5H4 357 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 FAM47BQ8NA70 645 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 FAM57AQ8TBR7 257 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 SERINC2Q96SA4 455 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 SPOCK3Q9BQ16 436 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 TMEM79Q9BSE2 394 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 TIMMDC1Q9NPL8 285 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 DNAJC11Q9NVH1 559 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 WWOXQ9NZC7 414 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 PPT2Q9UMR5 302 aa16.55■□□□□ 0.24
SSBP1-215ENST00000612337 YARS2Q9Y2Z4 477 aaKnown RBP16.55■□□□□ 0.24
SSBP1-215ENST00000612337 A0A1B0GTH9 108 aa16.54■□□□□ 0.24
SSBP1-215ENST00000612337 USP27XA6NNY8 438 aa16.54■□□□□ 0.24
SSBP1-215ENST00000612337 CYR61O00622 381 aa16.54■□□□□ 0.24
SSBP1-215ENST00000612337 CLGNO14967 610 aa16.54■□□□□ 0.24
SSBP1-215ENST00000612337 HS6ST1O60243 411 aa16.54■□□□□ 0.24
SSBP1-215ENST00000612337 PRKNO60260 465 aaPredicted RBP16.54■□□□□ 0.24
SSBP1-215ENST00000612337 PIAS1O75925 651 aa16.54■□□□□ 0.24
SSBP1-215ENST00000612337 CERS1P27544 350 aa16.54■□□□□ 0.24
SSBP1-215ENST00000612337 RPL21P46778 160 aaKnown RBP16.54■□□□□ 0.24
SSBP1-215ENST00000612337 MTTPP55157 894 aa16.54■□□□□ 0.24
SSBP1-215ENST00000612337 LIM2P55344 173 aa16.54■□□□□ 0.24
SSBP1-215ENST00000612337 GNG11P61952 73 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms