RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 IDSP22304 550 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 GTF2E2P29084 291 aaKnown RBP8.33□□□□□ -1.08
LIG4-204ENST00000611712 ISL1P61371 349 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 NTHL1P78549 312 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 SLC7A9P82251 487 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 ZNF33BQ06732 778 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 GRIN2CQ14957 1233 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 CTU2Q2VPK5 515 aaKnown RBP8.33□□□□□ -1.08
LIG4-204ENST00000611712 UAP1L1Q3KQV9 507 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 NXPE4Q6UWF7 544 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 LRRTM4Q86VH4 590 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 DCUN1D3Q8IWE4 304 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.33□□□□□ -1.08
LIG4-204ENST00000611712 C16orf78Q8WTQ4 265 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 ZNF296Q8WUU4 475 aaPredicted RBP8.33□□□□□ -1.08
LIG4-204ENST00000611712 SLC9A6Q92581 669 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 RPL3LQ92901 407 aaKnown RBP8.33□□□□□ -1.08
LIG4-204ENST00000611712 CNDP2Q96KP4 475 aaKnown RBP8.33□□□□□ -1.08
LIG4-204ENST00000611712 F2RL3Q96RI0 385 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 CCDC3Q9BQI4 270 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 TRMT61BQ9BVS5 477 aaKnown RBP8.33□□□□□ -1.08
LIG4-204ENST00000611712 P2RX2Q9UBL9 471 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 SPIN1Q9Y657 262 aaPredicted RBP8.33□□□□□ -1.08
LIG4-204ENST00000611712 GON4LQ3T8J9 2241 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 GLOD5A6NK44 160 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 CLCA1A8K7I4 914 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 SLC30A4O14863 429 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 WISP3O95389 354 aaPredicted RBP8.33□□□□□ -1.08
LIG4-204ENST00000611712 BMP7P18075 431 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 UQCRC2P22695 453 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 CXCR4P61073 352 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 NFE2L1Q14494 772 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 SLC9A5Q14940 896 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 CRTC2Q53ET0 693 aaPredicted RBP8.33□□□□□ -1.08
LIG4-204ENST00000611712 GET4Q7L5D6 327 aaPredicted RBP8.33□□□□□ -1.08
LIG4-204ENST00000611712 RAB43Q86YS6 212 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 UBE2J2Q8N2K1 259 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 AP3S1Q92572 193 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 ZNF689Q96CS4 500 aaPredicted RBP8.33□□□□□ -1.08
LIG4-204ENST00000611712 CXorf40BQ96DE9 158 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 LRIG1Q96JA1 1093 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 ART5Q96L15 291 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 BRF2Q9HAW0 419 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 NEUROD4Q9HD90 331 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 ACOT13Q9NPJ3 140 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 HS3ST2Q9Y278 367 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 TBC1D3DA0A087WVF3 549 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 TBC1D3IA0A087WXS9 549 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 TBC1D3EA0A087X179 549 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 TBC1D3KA0A087X1G2 549 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 TBC1D3FA6NER0 549 aaPredicted RBP8.32□□□□□ -1.08
LIG4-204ENST00000611712 TBC1D3LB9A6J9 549 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 TAF4O00268 1085 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 SLC16A6O15403 523 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 TBC1D3HP0C7X1 549 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 IMPDH2P12268 514 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 PCGF2P35227 344 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 NKG7Q16617 165 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 KLHL12Q53G59 568 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 TBC1D3GQ6DHY5 549 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 TBC1D3CQ6IPX1 549 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 Q6ZNX1 250 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 ZNF551Q7Z340 670 aaPredicted RBP8.32□□□□□ -1.08
LIG4-204ENST00000611712 TBC1D3Q8IZP1 549 aaPredicted RBP8.32□□□□□ -1.08
LIG4-204ENST00000611712 LILRA3Q8N6C8 439 aaPredicted RBP8.32□□□□□ -1.08
LIG4-204ENST00000611712 RASGEF1AQ8N9B8 481 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 OR52L1Q8NGH7 329 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 UBE2FQ969M7 185 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 EID2BQ96D98 161 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 ZNF300Q96RE9 604 aaPredicted RBP8.32□□□□□ -1.08
LIG4-204ENST00000611712 MBOAT4Q96T53 435 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 ANKHQ9HCJ1 492 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 CCRL2O00421 344 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 CAPN5O15484 640 aaPredicted RBP8.32□□□□□ -1.08
LIG4-204ENST00000611712 ERI3O43414 337 aaKnown RBP8.32□□□□□ -1.08
LIG4-204ENST00000611712 CTSAP10619 480 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 ALPPL2P10696 532 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 TIMP2P16035 220 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 SLC15A1P46059 708 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 NRIP1P48552 1158 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 RORCP51449 518 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 PPP5CP53041 499 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 CRISP1P54107 249 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 HBA1P69905 142 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 PRR5P85299 388 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 CLEC12AQ5QGZ9 265 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 LRIF1Q5T3J3 769 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 HMGN2P46Q86SG4 172 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 C10orf53Q8N6V4 93 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 SRFBP1Q8NEF9 429 aaKnown RBP8.32□□□□□ -1.08
LIG4-204ENST00000611712 OR2A12Q8NGT7 310 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 ZNF480Q8WV37 535 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 PHF21AQ96BD5 680 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 TCEAL4Q96EI5 215 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 BCL7BQ9BQE9 202 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 YIPF2Q9BWQ6 316 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 ZDHHC4Q9NPG8 344 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 ASIC5Q9NY37 505 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 MAN2B2Q9Y2E5 1009 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 INSL6Q9Y581 213 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms