RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 FAM69BQ5VUD6 431 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 UBE3DQ7Z6J8 389 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 CUZD1Q86UP6 607 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 CA13Q8N1Q1 262 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 RNF175Q8N4F7 328 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 ACOT4Q8N9L9 421 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 ADAMTS17Q8TE56 1095 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 METTL21AQ8WXB1 218 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 ARL8AQ96BM9 186 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 QRFPRQ96P65 431 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 SH3GL2Q99962 352 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 PAIP2Q9BPZ3 127 aaKnown RBP13.47□□□□□ -0.25
CTSA-219ENST00000607841 MKL2Q9ULH7 1088 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 SLC12A4Q9UP95 1085 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 ZFHX4Q86UP3 3567 aa13.47□□□□□ -0.25
CTSA-219ENST00000607841 SPTBP11277 2137 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 HMGB1P1B2RPK0 211 aaPredicted RBP13.46□□□□□ -0.25
CTSA-219ENST00000607841 IDSB3KWA1 339 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 PLPP1O14494 284 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 SCELO95171 688 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 CHEK2O96017 543 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 SERPINE1P05121 402 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 GRK2P25098 689 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 ATP5A1P25705 553 aaKnown RBP13.46□□□□□ -0.25
CTSA-219ENST00000607841 RUNX2Q13950 521 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 CHI3L2Q15782 390 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 DEFB109BQ30KR1 87 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 TUBB8Q3ZCM7 444 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 ARL13AQ5H913 290 aaPredicted RBP13.46□□□□□ -0.25
CTSA-219ENST00000607841 ATP1A1-AS1Q5TC04 95 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 BORAQ6PGQ7 559 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 MED25Q71SY5 747 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 PAGE2Q7Z2X7 111 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 LAPTM4BQ86VI4 370 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 NUDT13Q86X67 352 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 ZCCHC7Q8N3Z6 543 aaKnown RBP13.46□□□□□ -0.25
CTSA-219ENST00000607841 CRELD1Q96HD1 420 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 FER1L6-AS2Q96M78 137 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 LYRM4Q9HD34 91 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 FARSBQ9NSD9 589 aaKnown RBP13.46□□□□□ -0.25
CTSA-219ENST00000607841 MS4A12Q9NXJ0 267 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 VPS29Q9UBQ0 182 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 DAPP1Q9UN19 280 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 MRPS33Q9Y291 106 aaKnown RBP13.46□□□□□ -0.25
CTSA-219ENST00000607841 MAN2B2Q9Y2E5 1009 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 TIMM22Q9Y584 194 aa13.46□□□□□ -0.25
CTSA-219ENST00000607841 LAMA5O15230 3695 aa13.46□□□□□ -0.26
CTSA-219ENST00000607841 ARHGAP10A1A4S6 786 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 SERTM1A2A2V5 107 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 TMEM114B3SHH9 223 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 RTCAO00442 366 aaKnown RBP13.45□□□□□ -0.26
CTSA-219ENST00000607841 CLDN4O14493 209 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 AZIN1O14977 448 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 DNAJB6O75190 326 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 ETHE1O95571 254 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 FGF4P08620 206 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 FURINP09958 794 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 CERS1P27544 350 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 CCR10P46092 362 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 RRADP55042 308 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 LIM2P55344 173 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 RAB38P57729 211 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 FOXL2P58012 376 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 SLAMF1Q13291 335 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 ABRAXAS2Q15018 415 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 TCHHL1Q5QJ38 904 aaPredicted RBP13.45□□□□□ -0.26
CTSA-219ENST00000607841 CYP20A1Q6UW02 462 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 ZNF793Q6ZN11 406 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 ZCCHC23Q6ZST2 131 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 PPP1R32Q7Z5V6 425 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 MRGPREQ86SM8 312 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 CLYBLQ8N0X4 340 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 TMEM102Q8N9M5 508 aaPredicted RBP13.45□□□□□ -0.26
CTSA-219ENST00000607841 OR6Y1Q8NGX8 325 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 APOBEC4Q8WW27 367 aaKnown RBP13.45□□□□□ -0.26
CTSA-219ENST00000607841 KCNA7Q96RP8 456 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 SHCBP1LQ9BZQ2 653 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 VN1R1Q9GZP7 353 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 DDX31Q9H8H2 851 aaKnown RBP13.45□□□□□ -0.26
CTSA-219ENST00000607841 C19orf25Q9UFG5 118 aaPredicted RBP13.45□□□□□ -0.26
CTSA-219ENST00000607841 PHF11Q9UIL8 331 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 ADAM29Q9UKF5 820 aa13.45□□□□□ -0.26
CTSA-219ENST00000607841 MDC1Q14676 2089 aaKnown RBP13.44□□□□□ -0.26
CTSA-219ENST00000607841 BLACEA4D250 179 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 SYNDIG1LA6NDD5 238 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 ZZEF1O43149 2961 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 PRMT3O60678 531 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 B4GALT2O60909 372 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 ALOX12BO75342 701 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 JRKO75564 520 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 CDC123O75794 336 aaPredicted RBP13.44□□□□□ -0.26
CTSA-219ENST00000607841 SASH3O75995 380 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 HSPA4LO95757 839 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 CHRNGP07510 517 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 C8orf89P0DMQ9 161 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 ACPPP15309 386 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 TLX1P31314 330 aaPredicted RBP13.44□□□□□ -0.26
CTSA-219ENST00000607841 BSGP35613 385 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 FOXA1P55317 472 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 IMPG1Q17R60 797 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms