RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 FASTKD3Q14CZ7 662 aaKnown RBP1.31□□□□□ -2.2
SNORA28-201ENST00000606769 ZNF146Q15072 292 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 PPA1Q15181 289 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 MAPK11Q15759 364 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 MLF2Q15773 248 aaPredicted RBP1.31□□□□□ -2.2
SNORA28-201ENST00000606769 C3AR1Q16581 482 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 ZNF789Q5FWF6 425 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 ARMCX4Q5H9R4 360 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 TCTEX1D4Q5JR98 221 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.31□□□□□ -2.2
SNORA28-201ENST00000606769 KCTD11Q693B1 232 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 TCEAL6Q6IPX3 200 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 C1orf186Q6ZWK4 172 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 PRSS42Q7Z5A4 293 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 LRRTM1Q86UE6 522 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 MYPOPQ86VE0 399 aaPredicted RBP1.31□□□□□ -2.2
SNORA28-201ENST00000606769 KCNMB4Q86W47 210 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 FAM9BQ8IZU0 186 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 SLC43A2Q8N370 569 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 CARNMT1Q8N4J0 409 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 ZNF713Q8N859 430 aaPredicted RBP1.31□□□□□ -2.2
SNORA28-201ENST00000606769 CLEC1AQ8NC01 280 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 C17orf47Q8NEP4 570 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 NUP37Q8NFH4 326 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 OR9Q2Q8NGE9 314 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 OR4D10Q8NGI6 311 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 OR10G7Q8NGN6 311 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 OR5M9Q8NGP3 310 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 RPLP0P6Q8NHW5 317 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 LIPHQ8WWY8 451 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 SEPT8Q92599 483 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 PNPLA2Q96AD5 504 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 NTNG2Q96CW9 530 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 MRPL53Q96EL3 112 aaKnown RBP1.31□□□□□ -2.2
SNORA28-201ENST00000606769 AGAP4Q96P64 663 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 PCDHB18PQ96TA0 734 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 IL12RB2Q99665 862 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 C17orf62Q9BQA9 187 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 JPH2Q9BR39 696 aaPredicted RBP1.31□□□□□ -2.2
SNORA28-201ENST00000606769 MCRIP2Q9BUT9 160 aaKnown RBP1.31□□□□□ -2.2
SNORA28-201ENST00000606769 UPF3AQ9H1J1 476 aaKnown RBP1.31□□□□□ -2.2
SNORA28-201ENST00000606769 DPEP2Q9H4A9 486 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 DPEP3Q9H4B8 488 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 ABCB8Q9NUT2 735 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 EXOC1Q9NV70 894 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 CTSZQ9UBR2 303 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 BAIAP2L1Q9UHR4 511 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 LNPEPQ9UIQ6 1025 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 FBXL5Q9UKA1 691 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 GMEB2Q9UKD1 530 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 PLCL2Q9UPR0 1127 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 NCKAP1Q9Y2A7 1128 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 ZNF510Q9Y2H8 683 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 ETV7Q9Y603 341 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 SELENOKQ9Y6D0 94 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 TEX264Q9Y6I9 313 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 PRSS21Q9Y6M0 314 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 ACEP12821 1306 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 SALL1Q9NSC2 1324 aa1.31□□□□□ -2.2
SNORA28-201ENST00000606769 IGLV4-3A0A075B6K6 122 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 A0A0J9YWU9 116 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 TMEM129A0AVI4 362 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 SLC15A5A6NIM6 579 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 M0R296 226 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 ZNF263O14978 683 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 SYT7O43581 403 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 VEGFDO43915 354 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 RTN2O75298 545 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 LETM1O95202 739 aaPredicted RBP1.3□□□□□ -2.2
SNORA28-201ENST00000606769 VENTXO95231 258 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 CPNE6O95741 557 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 FGF19O95750 216 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 TBX6O95947 436 aaPredicted RBP1.3□□□□□ -2.2
SNORA28-201ENST00000606769 EPOP01588 193 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 IGHG1P01857 330 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 CCDC159P0C7I6 412 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 SKILP12757 684 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 CAPN2P17655 700 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 AOC1P19801 751 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 GPX3P22352 226 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 SP100P23497 879 aaPredicted RBP1.3□□□□□ -2.2
SNORA28-201ENST00000606769 KRTAP5-9P26371 169 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 GPR183P32249 361 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 CTNNA1P35221 906 aaKnown RBP1.3□□□□□ -2.2
SNORA28-201ENST00000606769 CASP3P42574 277 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 CSRP3P50461 194 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 CCR4P51679 360 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 TKTL1P51854 596 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 SMSP52788 366 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 SNU13P55769 128 aaKnown RBP1.3□□□□□ -2.2
SNORA28-201ENST00000606769 NDUFV3P56181 108 aaKnown RBP1.3□□□□□ -2.2
SNORA28-201ENST00000606769 FKBP3Q00688 224 aaKnown RBP1.3□□□□□ -2.2
SNORA28-201ENST00000606769 ACTN3Q08043 901 aaPredicted RBP1.3□□□□□ -2.2
SNORA28-201ENST00000606769 COX10Q12887 443 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 RPS6KA1Q15418 735 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 SIX1Q15475 284 aaPredicted RBP1.3□□□□□ -2.2
SNORA28-201ENST00000606769 SPHARQ15513 63 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 UPP1Q16831 310 aa1.3□□□□□ -2.2
SNORA28-201ENST00000606769 KNOP1Q1ED39 458 aaKnown RBP1.3□□□□□ -2.2
SNORA28-201ENST00000606769 WSCD2Q2TBF2 565 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms