RNA–Protein interactions for RNA: ENST00000602959.5

UBE2E3-213, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2E3, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-213ENST00000602959 PRDM9Q9NQV7 894 aa22.75■■□□□ 1.23
UBE2E3-213ENST00000602959 TMEM216Q9P0N5 145 aa22.75■■□□□ 1.23
UBE2E3-213ENST00000602959 MMACHCQ9Y4U1 282 aa22.75■■□□□ 1.23
UBE2E3-213ENST00000602959 FLNCQ14315 2725 aa22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 FAM227AF5H4B4 570 aa22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 OR7A17O14581 309 aa22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 SCELO95171 688 aa22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 WISP1O95388 367 aa22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 CLDN9O95484 217 aa22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 ITGAMP11215 1152 aa22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 CCNG1P51959 295 aa22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 MLLT10P55197 1068 aa22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 OR4D2P58180 307 aa22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 BTG2P78543 158 aa22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 FOXK1P85037 733 aa22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 EXT1Q16394 746 aa22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 KHDRBS2Q5VWX1 349 aaKnown RBP22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 PAPD4Q6PIY7 484 aaKnown RBP22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 ZNF793Q6ZN11 406 aa22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 Q6ZS92 163 aa22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 OR52B6Q8NGF0 335 aa22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 NSUN5Q96P11 429 aaKnown RBP22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 LPAR4Q99677 370 aa22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 DMRT3Q9NQL9 472 aa22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 DAPP1Q9UN19 280 aa22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 RNF11Q9Y3C5 154 aa22.74■■□□□ 1.23
UBE2E3-213ENST00000602959 TCRBV16S1A1N1A0A5B0 115 aa22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 TTLL8A6PVC2 850 aa22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 GOLGA8RI6L899 631 aa22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 TGFB1P01137 390 aa22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 GSTA1P08263 222 aa22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 PYGBP11216 843 aa22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 MAOAP21397 527 aa22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 LIM2P55344 173 aa22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 PHEXP78562 749 aa22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 TRAF3Q13114 568 aa22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 DDX39BQ13838 428 aaKnown RBP22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 CPSF6Q16630 551 aaKnown RBP eCLIP22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 BTBD16Q32M84 506 aa22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 DEPDC1Q5TB30 811 aa22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 SCUBE1Q8IWY4 988 aa22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 SIRT6Q8N6T7 355 aa22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 WDR20Q8TBZ3 569 aa22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 ZNF483Q8TF39 744 aaPredicted RBP22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 MIB2Q96AX9 1013 aa22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 MTERF1Q99551 399 aaKnown RBP22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 SLAMF7Q9NQ25 335 aa22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 PTGFRNQ9P2B2 879 aa22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 SHANK1Q9Y566 2161 aa22.73■■□□□ 1.23
UBE2E3-213ENST00000602959 TAC1P20366 129 aa22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 ATP5A1P25705 553 aaKnown RBP22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 HSD17B3P37058 310 aa22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 TSFMP43897 325 aaKnown RBP22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 ARFIP1P53367 373 aa22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 RCN2Q14257 317 aa22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 PLEKHN1Q494U1 663 aaPredicted RBP22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 GGTA1PQ4G0N0 100 aa22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 WDR93Q6P2C0 686 aa22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 LINC00696Q6ZRV3 163 aa22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 ZNF595Q8IYB9 648 aa22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 RNF175Q8N4F7 328 aa22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 AMER2Q8N7J2 671 aa22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 ACOT4Q8N9L9 421 aa22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 ARMC2Q8NEN0 867 aa22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 M1APQ8TC57 530 aa22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 ATP6V1E2Q96A05 226 aa22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 CDK15Q96Q40 435 aa22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 OR51B5Q9H339 312 aa22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 LYRM4Q9HD34 91 aa22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 PRM3Q9NNZ6 103 aa22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 NECTIN3Q9NQS3 549 aa22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 LUZP4Q9P127 313 aa22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 PPT2Q9UMR5 302 aa22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 MRPS33Q9Y291 106 aaKnown RBP22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 CSAG2Q9Y5P2 127 aa22.72■■□□□ 1.23
UBE2E3-213ENST00000602959 CYR61O00622 381 aa22.71■■□□□ 1.23
UBE2E3-213ENST00000602959 HIST1H1TP22492 207 aaPredicted RBP22.71■■□□□ 1.23
UBE2E3-213ENST00000602959 SLCO1A2P46721 670 aa22.71■■□□□ 1.23
UBE2E3-213ENST00000602959 HSD17B7P56937 341 aa22.71■■□□□ 1.23
UBE2E3-213ENST00000602959 HERVK_113P63132 956 aa22.71■■□□□ 1.23
UBE2E3-213ENST00000602959 ACTN3Q08043 901 aaPredicted RBP22.71■■□□□ 1.23
UBE2E3-213ENST00000602959 ZRSR2Q15696 482 aaKnown RBP22.71■■□□□ 1.23
UBE2E3-213ENST00000602959 C10orf62Q5T681 223 aaPredicted RBP22.71■■□□□ 1.23
UBE2E3-213ENST00000602959 SH2D5Q6ZV89 423 aa22.71■■□□□ 1.23
UBE2E3-213ENST00000602959 TMEM52Q8NDY8 209 aa22.71■■□□□ 1.23
UBE2E3-213ENST00000602959 CPT1CQ8TCG5 803 aa22.71■■□□□ 1.23
UBE2E3-213ENST00000602959 EPS8L3Q8TE67 593 aaKnown RBP22.71■■□□□ 1.23
UBE2E3-213ENST00000602959 AENQ8WTP8 325 aaKnown RBP22.71■■□□□ 1.23
UBE2E3-213ENST00000602959 CENPKQ9BS16 269 aa22.71■■□□□ 1.23
UBE2E3-213ENST00000602959 ERVK-6Q9BXR3 956 aa22.71■■□□□ 1.23
UBE2E3-213ENST00000602959 ILKAPQ9H0C8 392 aaPredicted RBP22.71■■□□□ 1.23
UBE2E3-213ENST00000602959 MMP25Q9NPA2 562 aa22.71■■□□□ 1.23
UBE2E3-213ENST00000602959 SEMA4BQ9NPR2 832 aaPredicted RBP22.71■■□□□ 1.23
UBE2E3-213ENST00000602959 PSD3Q9NYI0 1048 aa22.71■■□□□ 1.23
UBE2E3-213ENST00000602959 KCMF1Q9P0J7 381 aa22.71■■□□□ 1.23
UBE2E3-213ENST00000602959 DCDC2Q9UHG0 476 aa22.71■■□□□ 1.23
UBE2E3-213ENST00000602959 CLDN16Q9Y5I7 305 aa22.71■■□□□ 1.23
UBE2E3-213ENST00000602959 A0A1W2PPM1 405 aa22.7■■□□□ 1.22
UBE2E3-213ENST00000602959 FOXE1O00358 373 aaPredicted RBP22.7■■□□□ 1.22
UBE2E3-213ENST00000602959 RTCAO00442 366 aaKnown RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms