RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 ADAM29Q9UKF5 820 aa13.11□□□□□ -0.31
RNF40-212ENST00000602784 POLHQ9Y253 713 aa13.11□□□□□ -0.31
RNF40-212ENST00000602784 CCDC88CQ9P219 2028 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 IDSB3KWA1 339 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 PLPP1O14494 284 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 DNAJB6O75190 326 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 ETHE1O95571 254 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 SERPINE1P05121 402 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 FHP07954 510 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 FURINP09958 794 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 ATXN8OSP0DMR3 200 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 PRKAR1AP10644 381 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 JAK1P23458 1154 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 BSGP35613 385 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 SSR2P43308 183 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 CCR10P46092 362 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 EMP2P54851 167 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 WDR4P57081 412 aaKnown RBP13.1□□□□□ -0.31
RNF40-212ENST00000602784 RUNX2Q13950 521 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 TUBB8Q3ZCM7 444 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 FAM69BQ5VUD6 431 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 C19orf48Q6RUI8 117 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 ZNF793Q6ZN11 406 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 RNF165Q6ZSG1 346 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 TRIM46Q7Z4K8 759 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 CA13Q8N1Q1 262 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 PPP1R14CQ8TAE6 165 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 VPS50Q96JG6 964 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 CRB3Q9BUF7 120 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 ZNF717Q9BY31 904 aaPredicted RBP13.1□□□□□ -0.31
RNF40-212ENST00000602784 SOX17Q9H6I2 414 aaPredicted RBP13.1□□□□□ -0.31
RNF40-212ENST00000602784 DDX31Q9H8H2 851 aaKnown RBP13.1□□□□□ -0.31
RNF40-212ENST00000602784 LANCL2Q9NS86 450 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 VPS29Q9UBQ0 182 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 C3orf18Q9UK00 162 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 MKL2Q9ULH7 1088 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 DAPP1Q9UN19 280 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 TIMM22Q9Y584 194 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 MGAQ8IWI9 3026 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 CACNA1BQ00975 2339 aa13.1□□□□□ -0.31
RNF40-212ENST00000602784 A0A0G2JN53 185 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 A0A1W2PQ72 361 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 CDC14CA4D256 554 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 TMEM114B3SHH9 223 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 PSMD12O00232 456 aaPredicted RBP13.09□□□□□ -0.31
RNF40-212ENST00000602784 SAP18O00422 153 aaKnown RBP13.09□□□□□ -0.31
RNF40-212ENST00000602784 AZIN1O14977 448 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 SH3BGRLO75368 114 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 CRCPO75575 148 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 HEXBP07686 556 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 CERS1P27544 350 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 FOXA1P55317 472 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 LIM2P55344 173 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 OLR1P78380 273 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 ABRAXAS2Q15018 415 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 CHI3L2Q15782 390 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 TTMPQ5BVD1 217 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 TCHHL1Q5QJ38 904 aaPredicted RBP13.09□□□□□ -0.31
RNF40-212ENST00000602784 SHISA6Q6ZSJ9 500 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 ZCCHC23Q6ZST2 131 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 PAGE2Q7Z2X7 111 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 PPP1R32Q7Z5V6 425 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 MRGPREQ86SM8 312 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 CUZD1Q86UP6 607 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 CLYBLQ8N0X4 340 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 METTL4Q8N3J2 472 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 ANKRD42Q8N9B4 389 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 PLPP5Q8NEB5 264 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 PEX11GQ96HA9 241 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 CRELD1Q96HD1 420 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 KCNA7Q96RP8 456 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 VN1R1Q9GZP7 353 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 TNFRSF12AQ9NP84 129 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 MS4A12Q9NXJ0 267 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 KCMF1Q9P0J7 381 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 SLC12A4Q9UP95 1085 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.09□□□□□ -0.31
RNF40-212ENST00000602784 TRAF6Q9Y4K3 522 aa13.09□□□□□ -0.31
RNF40-212ENST00000602784 A0A0A6YYD5 115 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 WDR91A4D1P6 747 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 BLACEA4D250 179 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 RTCAO00442 366 aaKnown RBP13.08□□□□□ -0.32
RNF40-212ENST00000602784 CYR61O00622 381 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 PEX12O00623 359 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 ATP8B1O43520 1251 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 JRKO75564 520 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 CHRNGP07510 517 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 ARRB2P32121 409 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 OTX2P32243 289 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 RAB38P57729 211 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 FOXL2P58012 376 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 RHAGQ02094 409 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 RHDQ02161 417 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 TBL3Q12788 808 aaKnown RBP13.08□□□□□ -0.32
RNF40-212ENST00000602784 ATP1A1-AS1Q5TC04 95 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 KANK2Q63ZY3 851 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 MRM1Q6IN84 353 aaKnown RBP13.08□□□□□ -0.32
RNF40-212ENST00000602784 TMEM205Q6UW68 189 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 QSOX2Q6ZRP7 698 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 NUDT13Q86X67 352 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms