RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 SLC9B1P1A6NJY1 282 aa16.51■□□□□ 0.23
PPFIA3-207ENST00000602716 AKAP10O43572 662 aa16.51■□□□□ 0.23
PPFIA3-207ENST00000602716 CER1O95813 267 aa16.51■□□□□ 0.23
PPFIA3-207ENST00000602716 KLK1P06870 262 aa16.51■□□□□ 0.23
PPFIA3-207ENST00000602716 CDH3P22223 829 aa16.51■□□□□ 0.23
PPFIA3-207ENST00000602716 HRH2P25021 359 aa16.51■□□□□ 0.23
PPFIA3-207ENST00000602716 PTX3P26022 381 aaPredicted RBP16.51■□□□□ 0.23
PPFIA3-207ENST00000602716 TPP2P29144 1249 aaPredicted RBP16.51■□□□□ 0.23
PPFIA3-207ENST00000602716 POLR2JP52435 117 aaKnown RBP16.51■□□□□ 0.23
PPFIA3-207ENST00000602716 HKDC1Q2TB90 917 aa16.51■□□□□ 0.23
PPFIA3-207ENST00000602716 RNF44Q7L0R7 432 aa16.51■□□□□ 0.23
PPFIA3-207ENST00000602716 DHFR2Q86XF0 187 aa16.51■□□□□ 0.23
PPFIA3-207ENST00000602716 PCYOX1LQ8NBM8 494 aa16.51■□□□□ 0.23
PPFIA3-207ENST00000602716 TEFMQ96QE5 360 aaKnown RBP16.51■□□□□ 0.23
PPFIA3-207ENST00000602716 C17orf62Q9BQA9 187 aa16.51■□□□□ 0.23
PPFIA3-207ENST00000602716 OSBPL11Q9BXB4 747 aa16.51■□□□□ 0.23
PPFIA3-207ENST00000602716 SNX13Q9Y5W8 968 aa16.51■□□□□ 0.23
PPFIA3-207ENST00000602716 LNP1A1A4G5 178 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 LRIT2A6NDA9 550 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 ANXA4P09525 319 aaPredicted RBP16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 BSGP35613 385 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 AHRP35869 848 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 PLA2G16P53816 162 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 RPS15AP62244 130 aaKnown RBP16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 NR1D2Q14995 579 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 TOR1AIP1Q5JTV8 583 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 SPANXN4Q5MJ08 99 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 PLA2G2CQ5R387 149 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 ANKRD26P1Q6NSI1 321 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 GALNT18Q6P9A2 607 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 ZNF793Q6ZN11 406 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 PRR23CQ6ZRP0 262 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 CARM1Q86X55 608 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 C19orf47Q8N9M1 422 aaKnown RBP16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 KCT2Q8NC54 265 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 TMEM74Q96NL1 305 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 EFHD1Q9BUP0 239 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 DPY30Q9C005 99 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 SEMA6CQ9H3T2 930 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 MAP10Q9P2G4 905 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 GMPR2Q9P2T1 348 aaKnown RBP16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 ABCD2Q9UBJ2 740 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 EXO1Q9UQ84 846 aaKnown RBP16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 IGHV5-51A0A0C4DH38 117 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 FAM234BA2RU67 622 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 PRPS2P11908 318 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 ACPPP15309 386 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 ATP6V1B2P21281 511 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 SERPINB1P30740 379 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 EPHA4P54764 986 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 MAP7Q14244 749 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 ADPRMQ3LIE5 342 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 PAGE3Q5JUK9 113 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 USP53Q70EK8 1073 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 SPRED1Q7Z699 444 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 HOMEZQ8IX15 550 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 RIMKLAQ8IXN7 391 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 ANKFN1Q8N957 763 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 MS4A6EQ96DS6 147 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 SLC29A1Q99808 456 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 ZFYVE21Q9BQ24 234 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 REXO4Q9GZR2 422 aaKnown RBP16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 CLMPQ9H6B4 373 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 ARMC1Q9NVT9 282 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 ADGRE2Q9UHX3 823 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 NDUFAF1Q9Y375 327 aa16.5■□□□□ 0.23
PPFIA3-207ENST00000602716 WDR87Q6ZQQ6 2873 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 GNG14A0A1W2PPG7 69 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 CPED1A4D0V7 1026 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 NME4O00746 187 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 TMPRSS11DO60235 418 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 SEMA3DO95025 777 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 C9P02748 559 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 MAPK1P28482 360 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 CD1CP29017 333 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 NR1H2P55055 460 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 CLDN8P56748 225 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 RAB8AP61006 207 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 PHC1P78364 1004 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 SF3A2Q15428 464 aaKnown RBP16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 ADRM1Q16186 407 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 FAM174BQ3ZCQ3 159 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 PRMT9Q6P2P2 845 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 KLHL35Q6PF15 583 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 BORAQ6PGQ7 559 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 SLC2A7Q6PXP3 512 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 B3GNT6Q6ZMB0 384 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 TMPRSS9Q7Z410 1059 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 AMIGO2Q86SJ2 522 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 ASPGQ86U10 573 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 SHISA5Q8N114 240 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 PRSS33Q8NF86 280 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 TTLQ8NG68 377 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 ZFP28Q8NHY6 868 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 SLC13A3Q8WWT9 602 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 ZUFSPQ96AP4 578 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 LOXL4Q96JB6 756 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 MPP4Q96JB8 637 aa16.49■□□□□ 0.23
PPFIA3-207ENST00000602716 HOPXQ9BPY8 73 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms