RNA–Protein interactions for RNA: ENST00000601194.1

PSMC4-205, Transcript of proteasome 26S subunit, ATPase 4, human

TSL 3

Gene PSMC4, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC4-205	ENST00000601194	ATP5A1	P25705	553 aa	Known RBP	13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	CRHR1	P34998	444 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	ARL1	P40616	181 aa	Predicted RBP	13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	NEK2	P51955	445 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	PRKAA2	P54646	552 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	CDH13	P55290	713 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	RPS13	P62277	151 aa	Known RBP	13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	SLC18A2	Q05940	514 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	IFFO1	Q0D2I5	559 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	KLRB1	Q12918	225 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	GGTA1P	Q4G0N0	100 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	UNC50	Q53HI1	259 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	ZNF678	Q5SXM1	525 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	DEPDC1	Q5TB30	811 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	LETMD1	Q6P1Q0	360 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	PRICKLE2	Q7Z3G6	844 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	ZNF605	Q86T29	641 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	HPS6	Q86YV9	775 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	SLC22A9	Q8IVM8	553 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	KBTBD2	Q8IY47	623 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	OR4F6	Q8NGB9	312 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	THOC3	Q96J01	351 aa	Known RBP	13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	TUBB6	Q9BUF5	446 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	ROGDI	Q9GZN7	287 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	COPS7B	Q9H9Q2	264 aa	Predicted RBP	13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	PRM3	Q9NNZ6	103 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	C5AR2	Q9P296	337 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	ANAPC2	Q9UJX6	822 aa		13.43	□□□□□ -0.26
PSMC4-205	ENST00000601194	GCN1	Q92616	2671 aa	Known RBP	13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	TNRC6A	Q8NDV7	1962 aa	Known RBP	13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	IGKV3D-11	A0A0A0MRZ8	115 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194		G3V2L1	256 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	FOXE1	O00358	373 aa	Predicted RBP	13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	SAP18	O00422	153 aa	Known RBP	13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	CYR61	O00622	381 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	PLPP1	O14494	284 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	PLIN3	O60664	434 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	ETHE1	O95571	254 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	TUBB	P07437	444 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	CELA2A	P08217	269 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	IMPDH1	P20839	514 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	MAOA	P21397	527 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	HIST1H1T	P22492	207 aa	Predicted RBP	13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	PTX3	P26022	381 aa	Predicted RBP	13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	DEK	P35659	375 aa	Known RBP	13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	SSR2	P43308	183 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	CCT5	P48643	541 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	HNRNPF	P52597	415 aa	Known RBP	13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	LIM2	P55344	173 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	RAB38	P57729	211 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	BTG2	P78543	158 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	PHEX	P78562	749 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	CLC	Q05315	142 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	SFT2D3	Q587I9	215 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	COLEC12	Q5KU26	742 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	C10orf62	Q5T681	223 aa	Predicted RBP	13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	IRAK1BP1	Q5VVH5	260 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	FRG2	Q64ET8	278 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	IGFL3	Q6UXB1	125 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	ZYG11A	Q6WRX3	759 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	RIPOR1	Q6ZS17	1223 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	MILR1	Q7Z6M3	343 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	TRABD2A	Q86V40	505 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	C4orf33	Q8N1A6	199 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	AMER2	Q8N7J2	671 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	ACOT4	Q8N9L9	421 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	TEX19	Q8NA77	164 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	ADAMTS18	Q8TE60	1221 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	TRPC4AP	Q8TEL6	797 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	L3HYPDH	Q96EM0	354 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	PTCHD1	Q96NR3	888 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	FRG2B	Q96QU4	278 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	ZNF717	Q9BY31	904 aa	Predicted RBP	13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	ROPN1B	Q9BZX4	212 aa	Predicted RBP	13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	ROPN1	Q9HAT0	212 aa	Predicted RBP	13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	ZBTB20	Q9HC78	741 aa	Predicted RBP	13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	LYRM4	Q9HD34	91 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	PRDM9	Q9NQV7	894 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	PSD3	Q9NYI0	1048 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	KCMF1	Q9P0J7	381 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	ZNF225	Q9UK10	706 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	GRID1	Q9ULK0	1009 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	PPT2	Q9UMR5	302 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	DAPP1	Q9UN19	280 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	MMACHC	Q9Y4U1	282 aa		13.42	□□□□□ -0.26
PSMC4-205	ENST00000601194	TCRBV16S1A1N1	A0A5B0	115 aa		13.41	□□□□□ -0.26
PSMC4-205	ENST00000601194	COPE	O14579	308 aa		13.41	□□□□□ -0.26
PSMC4-205	ENST00000601194	SLC28A2	O43868	658 aa		13.41	□□□□□ -0.26
PSMC4-205	ENST00000601194	DPM1	O60762	260 aa		13.41	□□□□□ -0.26
PSMC4-205	ENST00000601194	SUPT7L	O94864	414 aa		13.41	□□□□□ -0.26
PSMC4-205	ENST00000601194	MYL2	P10916	166 aa		13.41	□□□□□ -0.26
PSMC4-205	ENST00000601194	ICAM2	P13598	275 aa		13.41	□□□□□ -0.26
PSMC4-205	ENST00000601194	PLA2G2A	P14555	144 aa		13.41	□□□□□ -0.26
PSMC4-205	ENST00000601194	CASR	P41180	1078 aa		13.41	□□□□□ -0.26
PSMC4-205	ENST00000601194	TSFM	P43897	325 aa	Known RBP	13.41	□□□□□ -0.26
PSMC4-205	ENST00000601194	CD97	P48960	835 aa		13.41	□□□□□ -0.26
PSMC4-205	ENST00000601194	RAP1GDS1	P52306	607 aa		13.41	□□□□□ -0.26
PSMC4-205	ENST00000601194	ARFIP1	P53367	373 aa		13.41	□□□□□ -0.26
PSMC4-205	ENST00000601194	OR4D2	P58180	307 aa		13.41	□□□□□ -0.26
PSMC4-205	ENST00000601194	CUL3	Q13618	768 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms