RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 SERPINI1Q99574 410 aa17.85■□□□□ 0.45
CCDC9-205ENST00000600117 ILKAPQ9H0C8 392 aaPredicted RBP17.85■□□□□ 0.45
CCDC9-205ENST00000600117 ANKHQ9HCJ1 492 aa17.85■□□□□ 0.45
CCDC9-205ENST00000600117 LHX9Q9NQ69 397 aa17.85■□□□□ 0.45
CCDC9-205ENST00000600117 FIS1Q9Y3D6 152 aa17.85■□□□□ 0.45
CCDC9-205ENST00000600117 PTGDR2Q9Y5Y4 395 aa17.85■□□□□ 0.45
CCDC9-205ENST00000600117 A0A0G2JN53 185 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 H0YIG0 161 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 SAP18O00422 153 aaKnown RBP17.84■□□□□ 0.45
CCDC9-205ENST00000600117 PLPP1O14494 284 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 SEMA3DO95025 777 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 KLK3P07288 261 aaPredicted RBP17.84■□□□□ 0.45
CCDC9-205ENST00000600117 LIPCP11150 499 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 OR1D4P47884 311 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 PLA2G16P53816 162 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 DCDP81605 110 aaKnown RBP17.84■□□□□ 0.45
CCDC9-205ENST00000600117 ABHD18Q0P651 414 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 UBAP2LQ14157 1087 aaKnown RBP17.84■□□□□ 0.45
CCDC9-205ENST00000600117 TRIM40Q6P9F5 258 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 FAM199XQ6PEV8 388 aaPredicted RBP17.84■□□□□ 0.45
CCDC9-205ENST00000600117 FAM198BQ6UWH4 519 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 RGS9BPQ6ZS82 235 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 COX15Q7KZN9 410 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 TRIM46Q7Z4K8 759 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 GBP7Q8N8V2 638 aaPredicted RBP17.84■□□□□ 0.45
CCDC9-205ENST00000600117 AMER3Q8N944 861 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 LRRC8CQ8TDW0 803 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 TWIST2Q8WVJ9 160 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 MR1Q95460 341 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 NKD1Q969G9 470 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 MAGEB18Q96M61 343 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 C17orf62Q9BQA9 187 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 DPH2Q9BQC3 489 aaPredicted RBP17.84■□□□□ 0.45
CCDC9-205ENST00000600117 ZNF717Q9BY31 904 aaPredicted RBP17.84■□□□□ 0.45
CCDC9-205ENST00000600117 CHST8Q9H2A9 424 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 PRM3Q9NNZ6 103 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 PRDM7Q9NQW5 492 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 PADI1Q9ULC6 663 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 CDC14AQ9UNH5 594 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 NAALAD2Q9Y3Q0 740 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 CCL27Q9Y4X3 112 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 MAU2Q9Y6X3 613 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 CREBBPQ92793 2442 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 ITPR2Q14571 2701 aa17.84■□□□□ 0.45
CCDC9-205ENST00000600117 ZNF860A6NHJ4 632 aa17.83■□□□□ 0.44
CCDC9-205ENST00000600117 SGK494L7N484 410 aa17.83■□□□□ 0.44
CCDC9-205ENST00000600117 RTCAO00442 366 aaKnown RBP17.83■□□□□ 0.44
CCDC9-205ENST00000600117 DNAJB6O75190 326 aa17.83■□□□□ 0.44
CCDC9-205ENST00000600117 BSGP35613 385 aa17.83■□□□□ 0.44
CCDC9-205ENST00000600117 STAT5AP42229 794 aa17.83■□□□□ 0.44
CCDC9-205ENST00000600117 AVPR1BP47901 424 aa17.83■□□□□ 0.44
CCDC9-205ENST00000600117 ARFIP1P53367 373 aa17.83■□□□□ 0.44
CCDC9-205ENST00000600117 BTN3A2P78410 334 aa17.83■□□□□ 0.44
CCDC9-205ENST00000600117 TLE1Q04724 770 aa17.83■□□□□ 0.44
CCDC9-205ENST00000600117 TBL3Q12788 808 aaKnown RBP17.83■□□□□ 0.44
CCDC9-205ENST00000600117 DSG2Q14126 1118 aa17.83■□□□□ 0.44
CCDC9-205ENST00000600117 TGIF1Q15583 401 aa17.83■□□□□ 0.44
CCDC9-205ENST00000600117 ZNF793Q6ZN11 406 aa17.83■□□□□ 0.44
CCDC9-205ENST00000600117 CACNA2D3Q8IZS8 1091 aa17.83■□□□□ 0.44
CCDC9-205ENST00000600117 SHISA5Q8N114 240 aa17.83■□□□□ 0.44
CCDC9-205ENST00000600117 SRFBP1Q8NEF9 429 aaKnown RBP17.83■□□□□ 0.44
CCDC9-205ENST00000600117 FAM76AQ8TAV0 307 aa17.83■□□□□ 0.44
CCDC9-205ENST00000600117 RGMAQ96B86 450 aa17.83■□□□□ 0.44
CCDC9-205ENST00000600117 MMABQ96EY8 250 aaPredicted RBP17.83■□□□□ 0.44
CCDC9-205ENST00000600117 KCNC2Q96PR1 638 aa17.83■□□□□ 0.44
CCDC9-205ENST00000600117 TBCDQ9BTW9 1192 aa17.83■□□□□ 0.44
CCDC9-205ENST00000600117 SORBS1Q9BX66 1292 aaKnown RBP17.83■□□□□ 0.44
CCDC9-205ENST00000600117 ZNF304Q9HCX3 659 aa17.83■□□□□ 0.44
CCDC9-205ENST00000600117 PNPOQ9NVS9 261 aa17.83■□□□□ 0.44
CCDC9-205ENST00000600117 SLC12A4Q9UP95 1085 aa17.83■□□□□ 0.44
CCDC9-205ENST00000600117 PIP5K1BO14986 540 aa17.82■□□□□ 0.44
CCDC9-205ENST00000600117 RDH16O75452 317 aa17.82■□□□□ 0.44
CCDC9-205ENST00000600117 SCELO95171 688 aa17.82■□□□□ 0.44
CCDC9-205ENST00000600117 JUNP05412 331 aaKnown RBP17.82■□□□□ 0.44
CCDC9-205ENST00000600117 AGXTP21549 392 aa17.82■□□□□ 0.44
CCDC9-205ENST00000600117 RPL14P50914 215 aaKnown RBP17.82■□□□□ 0.44
CCDC9-205ENST00000600117 HMGCS1Q01581 520 aa17.82■□□□□ 0.44
CCDC9-205ENST00000600117 TGM3Q08188 693 aa17.82■□□□□ 0.44
CCDC9-205ENST00000600117 SLC9A5Q14940 896 aa17.82■□□□□ 0.44
CCDC9-205ENST00000600117 HOMEZQ8IX15 550 aa17.82■□□□□ 0.44
CCDC9-205ENST00000600117 CT55Q8WUE5 264 aa17.82■□□□□ 0.44
CCDC9-205ENST00000600117 MRPL1Q9BYD6 325 aaKnown RBP17.82■□□□□ 0.44
CCDC9-205ENST00000600117 SLCO1B3Q9NPD5 702 aa17.82■□□□□ 0.44
CCDC9-205ENST00000600117 FAM53CQ9NYF3 392 aa17.82■□□□□ 0.44
CCDC9-205ENST00000600117 VPS29Q9UBQ0 182 aa17.82■□□□□ 0.44
CCDC9-205ENST00000600117 LOC101059948A0A1B0GTJ6 334 aa17.81■□□□□ 0.44
CCDC9-205ENST00000600117 NPIPB8E9PQR5 432 aa17.81■□□□□ 0.44
CCDC9-205ENST00000600117 CNOT3O75175 753 aaKnown RBP17.81■□□□□ 0.44
CCDC9-205ENST00000600117 CHEK2O96017 543 aa17.81■□□□□ 0.44
CCDC9-205ENST00000600117 CCNYL3P0C7X3 344 aa17.81■□□□□ 0.44
CCDC9-205ENST00000600117 FBLP22087 321 aaKnown RBP17.81■□□□□ 0.44
CCDC9-205ENST00000600117 ATP5A1P25705 553 aaKnown RBP17.81■□□□□ 0.44
CCDC9-205ENST00000600117 CERS1P27544 350 aa17.81■□□□□ 0.44
CCDC9-205ENST00000600117 RAP1GDS1P52306 607 aa17.81■□□□□ 0.44
CCDC9-205ENST00000600117 MTTPP55157 894 aa17.81■□□□□ 0.44
CCDC9-205ENST00000600117 MAT1AQ00266 395 aaKnown RBP17.81■□□□□ 0.44
CCDC9-205ENST00000600117 SRSF6Q13247 344 aaKnown RBP17.81■□□□□ 0.44
CCDC9-205ENST00000600117 RUNX2Q13950 521 aa17.81■□□□□ 0.44
CCDC9-205ENST00000600117 SYT16Q17RD7 645 aa17.81■□□□□ 0.44
CCDC9-205ENST00000600117 XKR7Q5GH72 579 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms