RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 REPS1Q96D71 796 aa14.32□□□□□ -0.12
LIG1-219ENST00000600055 L3HYPDHQ96EM0 354 aa14.32□□□□□ -0.12
LIG1-219ENST00000600055 APOPT1Q96IL0 206 aa14.32□□□□□ -0.12
LIG1-219ENST00000600055 KCNC2Q96PR1 638 aa14.32□□□□□ -0.12
LIG1-219ENST00000600055 SERINC2Q96SA4 455 aa14.32□□□□□ -0.12
LIG1-219ENST00000600055 TBCDQ9BTW9 1192 aa14.32□□□□□ -0.12
LIG1-219ENST00000600055 NPLQ9BXD5 320 aaPredicted RBP14.32□□□□□ -0.12
LIG1-219ENST00000600055 ZNF700Q9H0M5 742 aa14.32□□□□□ -0.12
LIG1-219ENST00000600055 COPS7BQ9H9Q2 264 aaPredicted RBP14.32□□□□□ -0.12
LIG1-219ENST00000600055 MLXIPLQ9NP71 852 aa14.32□□□□□ -0.12
LIG1-219ENST00000600055 FARSBQ9NSD9 589 aaKnown RBP14.32□□□□□ -0.12
LIG1-219ENST00000600055 GPR83Q9NYM4 423 aa14.32□□□□□ -0.12
LIG1-219ENST00000600055 PCDHGA9Q9Y5G4 932 aaKnown RBP14.32□□□□□ -0.12
LIG1-219ENST00000600055 A0A088AWK7 358 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 A0A1W2PQ72 361 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 PLPP1O14494 284 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 SEC24DO94855 1032 aaPredicted RBP14.31□□□□□ -0.12
LIG1-219ENST00000600055 CPA3P15088 417 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 MAOAP21397 527 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 ZNF10P21506 573 aaPredicted RBP14.31□□□□□ -0.12
LIG1-219ENST00000600055 JAK1P23458 1154 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 ATP5A1P25705 553 aaKnown RBP14.31□□□□□ -0.12
LIG1-219ENST00000600055 PGDP52209 483 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 RAP1GDS1P52306 607 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 HNRNPFP52597 415 aaKnown RBP14.31□□□□□ -0.12
LIG1-219ENST00000600055 LIM2P55344 173 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 SOX8P57073 446 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 RAB38P57729 211 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 PHEXP78562 749 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 ABRAXAS2Q15018 415 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 NSDHLQ15738 373 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 AP5B1Q2VPB7 878 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 GGTA1PQ4G0N0 100 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 TCHHL1Q5QJ38 904 aaPredicted RBP14.31□□□□□ -0.12
LIG1-219ENST00000600055 FRG2Q64ET8 278 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 OR4C11Q6IEV9 310 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 IQCKQ8N0W5 287 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 CCNYL1Q8N7R7 359 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 ACOT4Q8N9L9 421 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 FAM47BQ8NA70 645 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 SRFBP1Q8NEF9 429 aaKnown RBP14.31□□□□□ -0.12
LIG1-219ENST00000600055 ARMC2Q8NEN0 867 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 THOC3Q96J01 351 aaKnown RBP14.31□□□□□ -0.12
LIG1-219ENST00000600055 VPS50Q96JG6 964 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 PTCHD1Q96NR3 888 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 ZIM3Q96PE6 472 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 FRG2BQ96QU4 278 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 CSF3RQ99062 836 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 MAPKAP1Q9BPZ7 522 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 GSTO2Q9H4Y5 243 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 ZNF552Q9H707 407 aaPredicted RBP14.31□□□□□ -0.12
LIG1-219ENST00000600055 NECTIN3Q9NQS3 549 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 SLC17A7Q9P2U7 560 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 PLLPQ9Y342 182 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 MED13Q9UHV7 2174 aa14.31□□□□□ -0.12
LIG1-219ENST00000600055 SMG1Q96Q15 3661 aaKnown RBP14.3□□□□□ -0.12
LIG1-219ENST00000600055 ATRXP46100 2492 aa14.3□□□□□ -0.12
LIG1-219ENST00000600055 FOXE1O00358 373 aaPredicted RBP14.3□□□□□ -0.12
LIG1-219ENST00000600055 PCDH17O14917 1159 aa14.3□□□□□ -0.12
LIG1-219ENST00000600055 PRMT3O60678 531 aa14.3□□□□□ -0.12
LIG1-219ENST00000600055 CYC1P08574 325 aa14.3□□□□□ -0.12
LIG1-219ENST00000600055 HIST1H1TP22492 207 aaPredicted RBP14.3□□□□□ -0.12
LIG1-219ENST00000600055 PTX3P26022 381 aaPredicted RBP14.3□□□□□ -0.12
LIG1-219ENST00000600055 SSR2P43308 183 aa14.3□□□□□ -0.12
LIG1-219ENST00000600055 NAGLUP54802 743 aa14.3□□□□□ -0.12
LIG1-219ENST00000600055 C19orf57Q0VDD7 668 aa14.3□□□□□ -0.12
LIG1-219ENST00000600055 IFT88Q13099 833 aa14.3□□□□□ -0.12
LIG1-219ENST00000600055 MYBPC3Q14896 1274 aa14.3□□□□□ -0.12
LIG1-219ENST00000600055 SFT2D3Q587I9 215 aa14.3□□□□□ -0.12
LIG1-219ENST00000600055 C10orf107Q8IVU9 208 aa14.3□□□□□ -0.12
LIG1-219ENST00000600055 CDYL2Q8N8U2 506 aa14.3□□□□□ -0.12
LIG1-219ENST00000600055 RGMAQ96B86 450 aa14.3□□□□□ -0.12
LIG1-219ENST00000600055 CCDC126Q96EE4 140 aa14.3□□□□□ -0.12
LIG1-219ENST00000600055 IMMP1LQ96LU5 166 aa14.3□□□□□ -0.12
LIG1-219ENST00000600055 ZNF382Q96SR6 550 aa14.3□□□□□ -0.12
LIG1-219ENST00000600055 SMAD5Q99717 465 aaKnown RBP14.3□□□□□ -0.12
LIG1-219ENST00000600055 WDR77Q9BQA1 342 aaPredicted RBP14.3□□□□□ -0.12
LIG1-219ENST00000600055 ZNF717Q9BY31 904 aaPredicted RBP14.3□□□□□ -0.12
LIG1-219ENST00000600055 ROGDIQ9GZN7 287 aa14.3□□□□□ -0.12
LIG1-219ENST00000600055 ZBTB20Q9HC78 741 aaPredicted RBP14.3□□□□□ -0.12
LIG1-219ENST00000600055 MKS1Q9NXB0 559 aa14.3□□□□□ -0.12
LIG1-219ENST00000600055 KCMF1Q9P0J7 381 aa14.3□□□□□ -0.12
LIG1-219ENST00000600055 TRPS1Q9UHF7 1281 aa14.3□□□□□ -0.12
LIG1-219ENST00000600055 DAPP1Q9UN19 280 aa14.3□□□□□ -0.12
LIG1-219ENST00000600055 PIEZO2Q9H5I5 2752 aa14.29□□□□□ -0.12
LIG1-219ENST00000600055 MYOCOSA0A1B0GUC4 107 aa14.29□□□□□ -0.12
LIG1-219ENST00000600055 B8ZZF3 427 aa14.29□□□□□ -0.12
LIG1-219ENST00000600055 TGFBR3LH3BV60 316 aa14.29□□□□□ -0.12
LIG1-219ENST00000600055 CYR61O00622 381 aa14.29□□□□□ -0.12
LIG1-219ENST00000600055 UBFD1O14562 309 aaKnown RBP14.29□□□□□ -0.12
LIG1-219ENST00000600055 EEDO75530 441 aaKnown RBP14.29□□□□□ -0.12
LIG1-219ENST00000600055 SCELO95171 688 aa14.29□□□□□ -0.12
LIG1-219ENST00000600055 PDYNP01213 254 aa14.29□□□□□ -0.12
LIG1-219ENST00000600055 PRR35P0CG20 571 aa14.29□□□□□ -0.12
LIG1-219ENST00000600055 BSGP35613 385 aa14.29□□□□□ -0.12
LIG1-219ENST00000600055 OR4D2P58180 307 aa14.29□□□□□ -0.12
LIG1-219ENST00000600055 DNAJB13P59910 316 aa14.29□□□□□ -0.12
LIG1-219ENST00000600055 ACTN3Q08043 901 aaPredicted RBP14.29□□□□□ -0.12
LIG1-219ENST00000600055 LCP2Q13094 533 aa14.29□□□□□ -0.12
LIG1-219ENST00000600055 SLAMF1Q13291 335 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms