RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	MS4A6E	Q96DS6	147 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	RILP	Q96NA2	401 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	DCBLD2	Q96PD2	775 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	DPH2	Q9BQC3	489 aa	Predicted RBP	20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	ROGDI	Q9GZN7	287 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	CHST8	Q9H2A9	424 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	KLHL31	Q9H511	634 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	AKTIP	Q9H8T0	292 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	KCNK13	Q9HB14	408 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	TCF7L2	Q9NQB0	619 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	WDR70	Q9NW82	654 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026		A0A088AWK7	358 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026		A0A0A6YYC8	382 aa	Predicted RBP	20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	LOC101059948	A0A1B0GTJ6	334 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	C4orf51	C9J302	202 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026		I3L1I5	382 aa	Predicted RBP	20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	SAP18	O00422	153 aa	Known RBP	20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	LSM1	O15116	133 aa	Known RBP	20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	ZNF888	P0CJ79	500 aa	Predicted RBP	20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	ATXN8OS	P0DMR3	200 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	LBP	P18428	481 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	IL1RN	P18510	177 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	ZNF10	P21506	573 aa	Predicted RBP	20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	OR1D4	P47884	311 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	DCD	P81605	110 aa	Known RBP	20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	CBX1	P83916	185 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	SLC9A5	Q14940	896 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	SMU1	Q2TAY7	513 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	NKAIN1	Q4KMZ8	207 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	PRMT9	Q6P2P2	845 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	PRSS41	Q7RTY9	318 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	PAGE2	Q7Z2X7	111 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	VASH2	Q86V25	355 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	METTL4	Q8N3J2	472 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	UTP15	Q8TED0	518 aa	Known RBP	20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	MVB12A	Q96EY5	273 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	QRFPR	Q96P65	431 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	KCNC2	Q96PR1	638 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	EBF4	Q9BQW3	602 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	TBCD	Q9BTW9	1192 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	MRPL1	Q9BYD6	325 aa	Known RBP	20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	CROT	Q9UKG9	612 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	TMED5	Q9Y3A6	229 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	SLC22A7	Q9Y694	548 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	MAU2	Q9Y6X3	613 aa		20.8	■□□□□ 0.92
LTBP4-227	ENST00000600026	APC2	O95996	2303 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	KLK10	O43240	276 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	SNX3	O60493	162 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	ALOX12	P18054	663 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	MAPK1	P28482	360 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	DLST	P36957	453 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	TSFM	P43897	325 aa	Known RBP	20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	PLA2G16	P53816	162 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	RAB8A	P61006	207 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	SKP1	P63208	163 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	TBL3	Q12788	808 aa	Known RBP	20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	SRSF6	Q13247	344 aa	Known RBP	20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	HERC3	Q15034	1050 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	C6orf136	Q5SQH8	315 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	ARHGAP40	Q5TG30	622 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	OR4C11	Q6IEV9	310 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	NIPAL1	Q6NVV3	410 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	ABHD17C	Q6PCB6	329 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	LARP4	Q71RC2	724 aa	Known RBP eCLIP	20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	COX15	Q7KZN9	410 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	PDSS2	Q86YH6	399 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	C1orf52	Q8N6N3	182 aa	Known RBP	20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	FNDC5	Q8NAU1	212 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	OR9A4	Q8NGU2	314 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	CHTF18	Q8WVB6	975 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	MMAB	Q96EY8	250 aa	Predicted RBP	20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	APIP	Q96GX9	242 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	OR52B2	Q96RD2	323 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	C17orf62	Q9BQA9	187 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	DPH1	Q9BZG8	443 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	COPS7B	Q9H9Q2	264 aa	Predicted RBP	20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	ANKH	Q9HCJ1	492 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	SLC22A11	Q9NSA0	550 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	CDC14A	Q9UNH5	594 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	SEC16A	O15027	2179 aa		20.79	■□□□□ 0.92
LTBP4-227	ENST00000600026	PLPP1	O14494	284 aa		20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	TERT	O14746	1132 aa	Known RBP	20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	RRP8	O43159	456 aa	Known RBP	20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	NSA2	O95478	260 aa	Known RBP	20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	ONECUT2	O95948	504 aa		20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	SMIM10L1	P0DMW3	83 aa		20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	LIF	P15018	202 aa		20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	SSR2	P43308	183 aa		20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	AVPR1B	P47901	424 aa		20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	RPL38	P63173	70 aa	Known RBP	20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	DNASE1L3	Q13609	305 aa		20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	LSM12	Q3MHD2	195 aa	Known RBP	20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	GKAP1	Q5VSY0	366 aa	Predicted RBP	20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	SPATA19	Q7Z5L4	167 aa		20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	PIGW	Q7Z7B1	504 aa		20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	NUDT13	Q86X67	352 aa		20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	SPACA3	Q8IXA5	215 aa		20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	PARP9	Q8IXQ6	854 aa		20.78	■□□□□ 0.92
LTBP4-227	ENST00000600026	C10orf82	Q8WW14	230 aa		20.78	■□□□□ 0.92

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms