RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 IFFO1Q0D2I5 559 aa26.51■■□□□ 1.83
SSBP4-206ENST00000599699 ZRSR2Q15696 482 aaKnown RBP26.51■■□□□ 1.83
SSBP4-206ENST00000599699 AP5B1Q2VPB7 878 aa26.51■■□□□ 1.83
SSBP4-206ENST00000599699 KHDRBS2Q5VWX1 349 aaKnown RBP26.51■■□□□ 1.83
SSBP4-206ENST00000599699 ZADH2Q8N4Q0 377 aa26.51■■□□□ 1.83
SSBP4-206ENST00000599699 ARMC2Q8NEN0 867 aa26.51■■□□□ 1.83
SSBP4-206ENST00000599699 PRDM7Q9NQW5 492 aa26.51■■□□□ 1.83
SSBP4-206ENST00000599699 J3QKU1 62 aa26.5■■□□□ 1.83
SSBP4-206ENST00000599699 RTCAO00442 366 aaKnown RBP26.5■■□□□ 1.83
SSBP4-206ENST00000599699 MAOAP21397 527 aa26.5■■□□□ 1.83
SSBP4-206ENST00000599699 ATP5F1P24539 256 aaPredicted RBP26.5■■□□□ 1.83
SSBP4-206ENST00000599699 SSR2P43308 183 aa26.5■■□□□ 1.83
SSBP4-206ENST00000599699 RAB38P57729 211 aa26.5■■□□□ 1.83
SSBP4-206ENST00000599699 RPS13P62277 151 aaKnown RBP26.5■■□□□ 1.83
SSBP4-206ENST00000599699 TLE1Q04724 770 aa26.5■■□□□ 1.83
SSBP4-206ENST00000599699 RCN2Q14257 317 aa26.5■■□□□ 1.83
SSBP4-206ENST00000599699 BTBD16Q32M84 506 aa26.5■■□□□ 1.83
SSBP4-206ENST00000599699 DEPDC1Q5TB30 811 aa26.5■■□□□ 1.83
SSBP4-206ENST00000599699 TTC19Q6DKK2 380 aaPredicted RBP26.5■■□□□ 1.83
SSBP4-206ENST00000599699 QSOX2Q6ZRP7 698 aa26.5■■□□□ 1.83
SSBP4-206ENST00000599699 RIPOR1Q6ZS17 1223 aa26.5■■□□□ 1.83
SSBP4-206ENST00000599699 UBE3DQ7Z6J8 389 aa26.5■■□□□ 1.83
SSBP4-206ENST00000599699 MILR1Q7Z6M3 343 aa26.5■■□□□ 1.83
SSBP4-206ENST00000599699 RBMXL3Q8N7X1 1067 aaKnown RBP26.5■■□□□ 1.83
SSBP4-206ENST00000599699 FAM47BQ8NA70 645 aa26.5■■□□□ 1.83
SSBP4-206ENST00000599699 BRIX1Q8TDN6 353 aaKnown RBP26.5■■□□□ 1.83
SSBP4-206ENST00000599699 ADAMTS18Q8TE60 1221 aa26.5■■□□□ 1.83
SSBP4-206ENST00000599699 ZNF483Q8TF39 744 aaPredicted RBP26.5■■□□□ 1.83
SSBP4-206ENST00000599699 IMMP1LQ96LU5 166 aa26.5■■□□□ 1.83
SSBP4-206ENST00000599699 MAGEB10Q96LZ2 347 aaPredicted RBP26.5■■□□□ 1.83
SSBP4-206ENST00000599699 NTMT1Q9BV86 223 aa26.5■■□□□ 1.83
SSBP4-206ENST00000599699 ZBTB20Q9HC78 741 aaPredicted RBP26.5■■□□□ 1.83
SSBP4-206ENST00000599699 ZBTB26Q9HCK0 441 aa26.5■■□□□ 1.83
SSBP4-206ENST00000599699 PRDM9Q9NQV7 894 aa26.5■■□□□ 1.83
SSBP4-206ENST00000599699 PTGFRNQ9P2B2 879 aa26.5■■□□□ 1.83
SSBP4-206ENST00000599699 MRPS33Q9Y291 106 aaKnown RBP26.5■■□□□ 1.83
SSBP4-206ENST00000599699 TSC22D4Q9Y3Q8 395 aa26.5■■□□□ 1.83
SSBP4-206ENST00000599699 PYCARD-AS1I3L0S3 204 aa26.49■■□□□ 1.83
SSBP4-206ENST00000599699 DLX3O60479 287 aa26.49■■□□□ 1.83
SSBP4-206ENST00000599699 GLRA3O75311 464 aa26.49■■□□□ 1.83
SSBP4-206ENST00000599699 TSPAN8P19075 237 aa26.49■■□□□ 1.83
SSBP4-206ENST00000599699 NEK2P51955 445 aa26.49■■□□□ 1.83
SSBP4-206ENST00000599699 CDH13P55290 713 aa26.49■■□□□ 1.83
SSBP4-206ENST00000599699 HERVK_113P63132 956 aa26.49■■□□□ 1.83
SSBP4-206ENST00000599699 RASA2Q15283 850 aa26.49■■□□□ 1.83
SSBP4-206ENST00000599699 JMJD6Q6NYC1 403 aaPredicted RBP26.49■■□□□ 1.83
SSBP4-206ENST00000599699 PAPD4Q6PIY7 484 aaKnown RBP26.49■■□□□ 1.83
SSBP4-206ENST00000599699 ISLR2Q6UXK2 745 aa26.49■■□□□ 1.83
SSBP4-206ENST00000599699 LINC00696Q6ZRV3 163 aa26.49■■□□□ 1.83
SSBP4-206ENST00000599699 SIRT6Q8N6T7 355 aa26.49■■□□□ 1.83
SSBP4-206ENST00000599699 RGMAQ96B86 450 aa26.49■■□□□ 1.83
SSBP4-206ENST00000599699 MTFMTQ96DP5 389 aaKnown RBP26.49■■□□□ 1.83
SSBP4-206ENST00000599699 LPAR4Q99677 370 aa26.49■■□□□ 1.83
SSBP4-206ENST00000599699 ERVK-6Q9BXR3 956 aa26.49■■□□□ 1.83
SSBP4-206ENST00000599699 PARD6BQ9BYG5 372 aa26.49■■□□□ 1.83
SSBP4-206ENST00000599699 EPS8L2Q9H6S3 715 aa26.49■■□□□ 1.83
SSBP4-206ENST00000599699 LUZP4Q9P127 313 aa26.49■■□□□ 1.83
SSBP4-206ENST00000599699 CLDN4O14493 209 aa26.48■■□□□ 1.83
SSBP4-206ENST00000599699 SUPT7LO94864 414 aa26.48■■□□□ 1.83
SSBP4-206ENST00000599699 OTCP00480 354 aa26.48■■□□□ 1.83
SSBP4-206ENST00000599699 ITGAMP11215 1152 aa26.48■■□□□ 1.83
SSBP4-206ENST00000599699 ATP5A1P25705 553 aaKnown RBP26.48■■□□□ 1.83
SSBP4-206ENST00000599699 PTX3P26022 381 aaPredicted RBP26.48■■□□□ 1.83
SSBP4-206ENST00000599699 CCT5P48643 541 aa26.48■■□□□ 1.83
SSBP4-206ENST00000599699 LIM2P55344 173 aa26.48■■□□□ 1.83
SSBP4-206ENST00000599699 TRAF3Q13114 568 aa26.48■■□□□ 1.83
SSBP4-206ENST00000599699 IGFL3Q6UXB1 125 aa26.48■■□□□ 1.83
SSBP4-206ENST00000599699 ZNF793Q6ZN11 406 aa26.48■■□□□ 1.83
SSBP4-206ENST00000599699 SLC22A9Q8IVM8 553 aa26.48■■□□□ 1.83
SSBP4-206ENST00000599699 AMER2Q8N7J2 671 aa26.48■■□□□ 1.83
SSBP4-206ENST00000599699 ACOT4Q8N9L9 421 aa26.48■■□□□ 1.83
SSBP4-206ENST00000599699 TRPC4APQ8TEL6 797 aa26.48■■□□□ 1.83
SSBP4-206ENST00000599699 CAVIN3Q969G5 261 aa26.48■■□□□ 1.83
SSBP4-206ENST00000599699 C1QTNF3Q9BXJ4 246 aa26.48■■□□□ 1.83
SSBP4-206ENST00000599699 SLAMF7Q9NQ25 335 aa26.48■■□□□ 1.83
SSBP4-206ENST00000599699 PRTFDC1Q9NRG1 225 aa26.48■■□□□ 1.83
SSBP4-206ENST00000599699 DAPP1Q9UN19 280 aa26.48■■□□□ 1.83
SSBP4-206ENST00000599699 MMACHCQ9Y4U1 282 aa26.48■■□□□ 1.83
SSBP4-206ENST00000599699 TTLL8A6PVC2 850 aa26.47■■□□□ 1.83
SSBP4-206ENST00000599699 NUDT17P0C025 328 aa26.47■■□□□ 1.83
SSBP4-206ENST00000599699 HIST1H1TP22492 207 aaPredicted RBP26.47■■□□□ 1.83
SSBP4-206ENST00000599699 CD97P48960 835 aa26.47■■□□□ 1.83
SSBP4-206ENST00000599699 IFT88Q13099 833 aa26.47■■□□□ 1.83
SSBP4-206ENST00000599699 EXT1Q16394 746 aa26.47■■□□□ 1.83
SSBP4-206ENST00000599699 CRB2Q5IJ48 1285 aa26.47■■□□□ 1.83
SSBP4-206ENST00000599699 ZNF678Q5SXM1 525 aa26.47■■□□□ 1.83
SSBP4-206ENST00000599699 SLC6A19Q695T7 634 aa26.47■■□□□ 1.83
SSBP4-206ENST00000599699 PLAG1Q6DJT9 500 aa26.47■■□□□ 1.83
SSBP4-206ENST00000599699 OR4C11Q6IEV9 310 aa26.47■■□□□ 1.83
SSBP4-206ENST00000599699 OR4F6Q8NGB9 312 aa26.47■■□□□ 1.83
SSBP4-206ENST00000599699 WDR20Q8TBZ3 569 aa26.47■■□□□ 1.83
SSBP4-206ENST00000599699 WDR77Q9BQA1 342 aaPredicted RBP26.47■■□□□ 1.83
SSBP4-206ENST00000599699 NECTIN3Q9NQS3 549 aa26.47■■□□□ 1.83
SSBP4-206ENST00000599699 SPACA6W5XKT8 324 aa26.47■■□□□ 1.83
SSBP4-206ENST00000599699 COPEO14579 308 aa26.46■■□□□ 1.83
SSBP4-206ENST00000599699 KRT4P19013 534 aa26.46■■□□□ 1.83
SSBP4-206ENST00000599699 CLCQ05315 142 aa26.46■■□□□ 1.83
SSBP4-206ENST00000599699 SLC13A2Q13183 592 aa26.46■■□□□ 1.83
SSBP4-206ENST00000599699 UNC50Q53HI1 259 aa26.46■■□□□ 1.83
SSBP4-206ENST00000599699 SGO1Q5FBB7 561 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms