RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 GOLGA8QA0A0J9YX86 632 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 GOLGA8OA6NCC3 632 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 C4orf51C9J302 202 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 GOLGA8NF8WBI6 632 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 RGS14O43566 566 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 DNAJB6O75190 326 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 VPS4BO75351 444 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 TGFB1P01137 390 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 AGXTP21549 392 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 PTX3P26022 381 aaPredicted RBP14.21□□□□□ -0.14
TRIM28-207ENST00000597136 ARFIP2P53365 341 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 EMP3P54852 163 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 IMPG1Q17R60 797 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 MUM1Q2TAK8 710 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 YOD1Q5VVQ6 348 aaPredicted RBP14.21□□□□□ -0.14
TRIM28-207ENST00000597136 TMEM214Q6NUQ4 689 aaKnown RBP14.21□□□□□ -0.14
TRIM28-207ENST00000597136 CCDC81Q6ZN84 652 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 LARP4Q71RC2 724 aaKnown RBP eCLIP14.21□□□□□ -0.148e-10■■■□□ 18.9
TRIM28-207ENST00000597136 OR9A4Q8NGU2 314 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 ACTRT2Q8TDY3 377 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 TUBGCP3Q96CW5 907 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 OR52B2Q96RD2 323 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 MS4A8Q9BY19 250 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 OR51B5Q9H339 312 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 AKTIPQ9H8T0 292 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 PRM3Q9NNZ6 103 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 RIC8BQ9NVN3 520 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 VPS29Q9UBQ0 182 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 SLC12A4Q9UP95 1085 aa14.21□□□□□ -0.14
TRIM28-207ENST00000597136 FARSAQ9Y285 508 aaKnown RBP14.21□□□□□ -0.14
TRIM28-207ENST00000597136 TXNDC9O14530 226 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 NDUFAB1O14561 156 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 LSM1O15116 133 aaKnown RBP14.2□□□□□ -0.14
TRIM28-207ENST00000597136 NKX2-8O15522 239 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 SH3BGRLO75368 114 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 ETHE1O95571 254 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 SERPINA6P08185 405 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 FURINP09958 794 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 IL1RNP18510 177 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 PWP1Q13610 501 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 NR6A1Q15406 480 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 SYT16Q17RD7 645 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 COL28A1Q2UY09 1125 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 LSM12Q3MHD2 195 aaKnown RBP14.2□□□□□ -0.14
TRIM28-207ENST00000597136 ATP1A1-AS1Q5TC04 95 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 ARHGAP40Q5TG30 622 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 GKAP1Q5VSY0 366 aaPredicted RBP14.2□□□□□ -0.14
TRIM28-207ENST00000597136 GARNL3Q5VVW2 1013 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 ACAD11Q709F0 780 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 PDSS2Q86YH6 399 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 ENDOVQ8N8Q3 282 aaKnown RBP14.2□□□□□ -0.14
TRIM28-207ENST00000597136 NT5CQ8TCD5 201 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 PROKR1Q8TCW9 393 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 MMABQ96EY8 250 aaPredicted RBP14.2□□□□□ -0.14
TRIM28-207ENST00000597136 CMTM7Q96FZ5 175 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 SERPINI1Q99574 410 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 SLC6A16Q9GZN6 736 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 ACTL8Q9H568 366 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 ZNF304Q9HCX3 659 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 TCF7L2Q9NQB0 619 aa14.2□□□□□ -0.14
TRIM28-207ENST00000597136 IFT80Q9P2H3 777 aaPredicted RBP14.2□□□□□ -0.14
TRIM28-207ENST00000597136 LRIT2A6NDA9 550 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 NPIPB8E9PQR5 432 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 PEX11AO75192 247 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 RSL1D1O76021 490 aaKnown RBP14.19□□□□□ -0.14
TRIM28-207ENST00000597136 ONECUT2O95948 504 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 SLC35G6P0C7Q6 338 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 PRR35P0CG20 571 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 ZNF888P0CJ79 500 aaPredicted RBP14.19□□□□□ -0.14
TRIM28-207ENST00000597136 PRPH2P23942 346 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 PTPN4P29074 926 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 HNRNPH1P31943 449 aaKnown RBP14.19□□□□□ -0.14
TRIM28-207ENST00000597136 RAB8AP61006 207 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 MAT1AQ00266 395 aaKnown RBP14.19□□□□□ -0.14
TRIM28-207ENST00000597136 CUL3Q13618 768 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 TOR1AIP1Q5JTV8 583 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 SPDYAQ5MJ70 313 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 DEPDC1Q5TB30 811 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 BROXQ5VW32 411 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 KHDRBS2Q5VWX1 349 aaKnown RBP14.19□□□□□ -0.14
TRIM28-207ENST00000597136 NXNQ6DKJ4 435 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 MRPL14Q6P1L8 145 aaKnown RBP14.19□□□□□ -0.14
TRIM28-207ENST00000597136 CHSY3Q70JA7 882 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 OVCH1Q7RTY7 1134 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 AMER3Q8N944 861 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 CEP70Q8NHQ1 597 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 UTP15Q8TED0 518 aaKnown RBP14.19□□□□□ -0.14
TRIM28-207ENST00000597136 COL26A1Q96A83 441 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 KIAA1143Q96AT1 154 aaPredicted RBP14.19□□□□□ -0.14
TRIM28-207ENST00000597136 SLC45A3Q96JT2 553 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 RILPQ96NA2 401 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 DPH2Q9BQC3 489 aaPredicted RBP14.19□□□□□ -0.14
TRIM28-207ENST00000597136 CCDC28BQ9BUN5 200 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 NLNQ9BYT8 704 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 NMRK1Q9NWW6 199 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 CTSFQ9UBX1 484 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 GIMAP2Q9UG22 337 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 BOD1L1Q8NFC6 3051 aa14.19□□□□□ -0.14
TRIM28-207ENST00000597136 A0A0G2JN53 185 aa14.18□□□□□ -0.14
TRIM28-207ENST00000597136 ZNF860A6NHJ4 632 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms