RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 COL1A2P08123 1366 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 TCRBV7S3A2A0A539 114 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 ARRDC5A6NEK1 342 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 A6NL46 340 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 IQCF5A8MTL0 148 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 FAM220BPB1ANY3 271 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 PCDH17O14917 1159 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 DSCR3O14972 297 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 ANKRD28O15084 1053 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 MITFO75030 526 aaPredicted RBP4.21□□□□□ -1.74
LRIT3-202ENST00000594814 NIPSNAP2O75323 286 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 STX11O75558 287 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 ERAL1O75616 437 aaKnown RBP4.21□□□□□ -1.74
LRIT3-202ENST00000594814 AQP8O94778 261 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 RGS11O94810 467 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 HTR3BO95264 441 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 FBP1P09467 338 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 HOXC6P09630 235 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 CYBAP13498 195 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 LBPP18428 481 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 MPSTP25325 297 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 STOMP27105 288 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 CD68P34810 354 aaPredicted RBP4.21□□□□□ -1.74
LRIT3-202ENST00000594814 CA5AP35218 305 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 PMELP40967 661 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 EEF1A1P68104 462 aaKnown RBP4.21□□□□□ -1.74
LRIT3-202ENST00000594814 NRG1Q02297 640 aaPredicted RBP4.21□□□□□ -1.74
LRIT3-202ENST00000594814 EEF1A2Q05639 463 aaKnown RBP4.21□□□□□ -1.74
LRIT3-202ENST00000594814 DMP1Q13316 513 aaPredicted RBP4.21□□□□□ -1.74
LRIT3-202ENST00000594814 MAD2L1BPQ15013 274 aaPredicted RBP4.21□□□□□ -1.74
LRIT3-202ENST00000594814 TIGD6Q17RP2 521 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 FBXO48Q5FWF7 155 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 PDZK1Q5T2W1 519 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 EEF1A1P5Q5VTE0 462 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 PRSS57Q6UWY2 283 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 LYPD8Q6UX82 237 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 CXCL17Q6UXB2 119 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 GK5Q6ZS86 529 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 TRIM46Q7Z4K8 759 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 B3GNT8Q7Z7M8 397 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 CBWD2Q8IUF1 395 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 ATG16L2Q8NAA4 619 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 FIBINQ8TAL6 211 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 FBXW5Q969U6 566 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 PHF21AQ96BD5 680 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 ORAI1Q96D31 301 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 CCDC120Q96HB5 630 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 SLC41A2Q96JW4 573 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 ZC3H10Q96K80 434 aaKnown RBP4.21□□□□□ -1.74
LRIT3-202ENST00000594814 TRIB1Q96RU8 372 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 NPAS1Q99742 590 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 ZNF334Q9HCZ1 680 aaPredicted RBP4.21□□□□□ -1.74
LRIT3-202ENST00000594814 IL26Q9NPH9 171 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 CATSPERZQ9NTU4 200 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 MED11Q9P086 117 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 PSORS1C1Q9UIG5 152 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 PLCL2Q9UPR0 1127 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 ENTPD4Q9Y227 616 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 VPS9D1Q9Y2B5 631 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 HSPB11Q9Y547 144 aa4.21□□□□□ -1.74
LRIT3-202ENST00000594814 IGKV6-21A0A0C4DH24 114 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 A0A1W2PPL8 197 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 ZNF729A6NN14 1252 aaPredicted RBP4.2□□□□□ -1.74
LRIT3-202ENST00000594814 PTGES3LE9PB15 166 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 FXYD1O00168 92 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 QSOX1O00391 747 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 INPP4BO15327 924 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 SLC28A2O43868 658 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 FAM20BO75063 409 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 GPR32O75388 356 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 WDR47O94967 919 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 PFKMP08237 780 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 CCNYL3P0C7X3 344 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 TFE3P19532 575 aaPredicted RBP4.2□□□□□ -1.74
LRIT3-202ENST00000594814 ARRB2P32121 409 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 CCT3P49368 545 aaKnown RBP4.2□□□□□ -1.74
LRIT3-202ENST00000594814 ACLYP53396 1101 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 OGDHQ02218 1023 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 BMPR2Q13873 1038 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 COL9A2Q14055 689 aaPredicted RBP4.2□□□□□ -1.74
LRIT3-202ENST00000594814 GPNMBQ14956 572 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 GRIK4Q16099 956 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 DUSP28Q4G0W2 176 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 PTPN20Q4JDL3 420 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 DDI2Q5TDH0 399 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 IER5Q5VY09 327 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 TMEM236Q5W0B7 351 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 ATG9BQ674R7 924 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 SCYL2Q6P3W7 929 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 AFTPHQ6ULP2 937 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 KIAA1324Q6UXG2 1013 aaKnown RBP4.2□□□□□ -1.74
LRIT3-202ENST00000594814 FAM183BPQ6ZVS7 135 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 LRRC8DQ7L1W4 858 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 MRPL52Q86TS9 123 aaKnown RBP4.2□□□□□ -1.74
LRIT3-202ENST00000594814 SPPL2CQ8IUH8 684 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 OXR1Q8N573 874 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 GLB1L3Q8NCI6 653 aaPredicted RBP4.2□□□□□ -1.74
LRIT3-202ENST00000594814 C19orf18Q8NEA5 215 aa4.2□□□□□ -1.74
LRIT3-202ENST00000594814 FAM83FQ8NEG4 500 aaPredicted RBP4.2□□□□□ -1.74
LRIT3-202ENST00000594814 SEMA4DQ92854 862 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms