RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 SMAD5Q99717 465 aaKnown RBP20.63■□□□□ 0.89
HOMER3-206ENST00000594439 C12orf65Q9H3J6 166 aaKnown RBP20.63■□□□□ 0.89
HOMER3-206ENST00000594439 ZNF552Q9H707 407 aaPredicted RBP20.63■□□□□ 0.89
HOMER3-206ENST00000594439 PRM3Q9NNZ6 103 aa20.63■□□□□ 0.89
HOMER3-206ENST00000594439 ZNF225Q9UK10 706 aa20.63■□□□□ 0.89
HOMER3-206ENST00000594439 PCDHGB7Q9Y5F8 929 aa20.63■□□□□ 0.89
HOMER3-206ENST00000594439 PSMD12O00232 456 aaPredicted RBP20.62■□□□□ 0.89
HOMER3-206ENST00000594439 RTCAO00442 366 aaKnown RBP20.62■□□□□ 0.89
HOMER3-206ENST00000594439 SUPT7LO94864 414 aa20.62■□□□□ 0.89
HOMER3-206ENST00000594439 SCELO95171 688 aa20.62■□□□□ 0.89
HOMER3-206ENST00000594439 OTCP00480 354 aa20.62■□□□□ 0.89
HOMER3-206ENST00000594439 ATP5A1P25705 553 aaKnown RBP20.62■□□□□ 0.89
HOMER3-206ENST00000594439 NEK2P51955 445 aa20.62■□□□□ 0.89
HOMER3-206ENST00000594439 RAB38P57729 211 aa20.62■□□□□ 0.89
HOMER3-206ENST00000594439 VWA5B1Q5TIE3 1220 aa20.62■□□□□ 0.89
HOMER3-206ENST00000594439 LETMD1Q6P1Q0 360 aa20.62■□□□□ 0.89
HOMER3-206ENST00000594439 QSOX2Q6ZRP7 698 aa20.62■□□□□ 0.89
HOMER3-206ENST00000594439 CPEB2Q7Z5Q1 589 aaKnown RBP20.62■□□□□ 0.89
HOMER3-206ENST00000594439 TRPC4APQ8TEL6 797 aa20.62■□□□□ 0.89
HOMER3-206ENST00000594439 PPP4R1Q8TF05 950 aa20.62■□□□□ 0.89
HOMER3-206ENST00000594439 IMMP1LQ96LU5 166 aa20.62■□□□□ 0.89
HOMER3-206ENST00000594439 ROGDIQ9GZN7 287 aa20.62■□□□□ 0.89
HOMER3-206ENST00000594439 COPS7BQ9H9Q2 264 aaPredicted RBP20.62■□□□□ 0.89
HOMER3-206ENST00000594439 RIC8BQ9NVN3 520 aa20.62■□□□□ 0.89
HOMER3-206ENST00000594439 MKS1Q9NXB0 559 aa20.62■□□□□ 0.89
HOMER3-206ENST00000594439 PSD3Q9NYI0 1048 aa20.62■□□□□ 0.89
HOMER3-206ENST00000594439 C19orf25Q9UFG5 118 aaPredicted RBP20.62■□□□□ 0.89
HOMER3-206ENST00000594439 G3BP2Q9UN86 482 aaKnown RBP20.62■□□□□ 0.89
HOMER3-206ENST00000594439 ZNF451Q9Y4E5 1061 aa20.62■□□□□ 0.89
HOMER3-206ENST00000594439 IGHV3-20A0A0C4DH32 117 aa20.61■□□□□ 0.89
HOMER3-206ENST00000594439 FOXE1O00358 373 aaPredicted RBP20.61■□□□□ 0.89
HOMER3-206ENST00000594439 SAP18O00422 153 aaKnown RBP20.61■□□□□ 0.89
HOMER3-206ENST00000594439 ETHE1O95571 254 aa20.61■□□□□ 0.89
HOMER3-206ENST00000594439 MYL2P10916 166 aa20.61■□□□□ 0.89
HOMER3-206ENST00000594439 PTX3P26022 381 aaPredicted RBP20.61■□□□□ 0.89
HOMER3-206ENST00000594439 LIM2P55344 173 aa20.61■□□□□ 0.89
HOMER3-206ENST00000594439 BTG2P78543 158 aa20.61■□□□□ 0.89
HOMER3-206ENST00000594439 PHEXP78562 749 aa20.61■□□□□ 0.89
HOMER3-206ENST00000594439 ABRAXAS2Q15018 415 aa20.61■□□□□ 0.89
HOMER3-206ENST00000594439 NSDHLQ15738 373 aa20.61■□□□□ 0.89
HOMER3-206ENST00000594439 FRG2Q64ET8 278 aa20.61■□□□□ 0.89
HOMER3-206ENST00000594439 ACOT4Q8N9L9 421 aa20.61■□□□□ 0.89
HOMER3-206ENST00000594439 CCDC126Q96EE4 140 aa20.61■□□□□ 0.89
HOMER3-206ENST00000594439 THOC3Q96J01 351 aaKnown RBP20.61■□□□□ 0.89
HOMER3-206ENST00000594439 MAGEB10Q96LZ2 347 aaPredicted RBP20.61■□□□□ 0.89
HOMER3-206ENST00000594439 FRG2BQ96QU4 278 aa20.61■□□□□ 0.89
HOMER3-206ENST00000594439 WDR77Q9BQA1 342 aaPredicted RBP20.61■□□□□ 0.89
HOMER3-206ENST00000594439 TUBB6Q9BUF5 446 aa20.61■□□□□ 0.89
HOMER3-206ENST00000594439 LHPPQ9H008 270 aa20.61■□□□□ 0.89
HOMER3-206ENST00000594439 PPT2Q9UMR5 302 aa20.61■□□□□ 0.89
HOMER3-206ENST00000594439 DAPP1Q9UN19 280 aa20.61■□□□□ 0.89
HOMER3-206ENST00000594439 KLHL41O60662 606 aa20.6■□□□□ 0.89
HOMER3-206ENST00000594439 PRMT3O60678 531 aa20.6■□□□□ 0.89
HOMER3-206ENST00000594439 ZNF844Q08AG5 666 aa20.6■□□□□ 0.89
HOMER3-206ENST00000594439 AP5B1Q2VPB7 878 aa20.6■□□□□ 0.89
HOMER3-206ENST00000594439 FAM219BQ5XKK7 198 aa20.6■□□□□ 0.89
HOMER3-206ENST00000594439 OR4C11Q6IEV9 310 aa20.6■□□□□ 0.89
HOMER3-206ENST00000594439 KBTBD2Q8IY47 623 aa20.6■□□□□ 0.89
HOMER3-206ENST00000594439 AMER2Q8N7J2 671 aa20.6■□□□□ 0.89
HOMER3-206ENST00000594439 BANPQ8N9N5 519 aa20.6■□□□□ 0.89
HOMER3-206ENST00000594439 TMEM52Q8NDY8 209 aa20.6■□□□□ 0.89
HOMER3-206ENST00000594439 MYRIPQ8NFW9 859 aa20.6■□□□□ 0.89
HOMER3-206ENST00000594439 RDH11Q8TC12 318 aa20.6■□□□□ 0.89
HOMER3-206ENST00000594439 ADAMTS18Q8TE60 1221 aa20.6■□□□□ 0.89
HOMER3-206ENST00000594439 RGMAQ96B86 450 aa20.6■□□□□ 0.89
HOMER3-206ENST00000594439 MTFMTQ96DP5 389 aaKnown RBP20.6■□□□□ 0.89
HOMER3-206ENST00000594439 APOPT1Q96IL0 206 aa20.6■□□□□ 0.89
HOMER3-206ENST00000594439 PTCHD1Q96NR3 888 aa20.6■□□□□ 0.89
HOMER3-206ENST00000594439 ZNF382Q96SR6 550 aa20.6■□□□□ 0.89
HOMER3-206ENST00000594439 SORBS1Q9BX66 1292 aaKnown RBP20.6■□□□□ 0.89
HOMER3-206ENST00000594439 KCMF1Q9P0J7 381 aa20.6■□□□□ 0.89
HOMER3-206ENST00000594439 C5AR2Q9P296 337 aa20.6■□□□□ 0.89
HOMER3-206ENST00000594439 TRPS1Q9UHF7 1281 aa20.6■□□□□ 0.89
HOMER3-206ENST00000594439 BOD1L1Q8NFC6 3051 aa20.59■□□□□ 0.89
HOMER3-206ENST00000594439 IGKV3D-11A0A0A0MRZ8 115 aa20.59■□□□□ 0.89
HOMER3-206ENST00000594439 PLPP1O14494 284 aa20.59■□□□□ 0.89
HOMER3-206ENST00000594439 SEC24DO94855 1032 aaPredicted RBP20.59■□□□□ 0.89
HOMER3-206ENST00000594439 OR4F21O95013 312 aa20.59■□□□□ 0.89
HOMER3-206ENST00000594439 SERPINA7P05543 415 aa20.59■□□□□ 0.89
HOMER3-206ENST00000594439 CELA2AP08217 269 aa20.59■□□□□ 0.89
HOMER3-206ENST00000594439 PRR35P0CG20 571 aa20.59■□□□□ 0.89
HOMER3-206ENST00000594439 HIST1H1TP22492 207 aaPredicted RBP20.59■□□□□ 0.89
HOMER3-206ENST00000594439 SSR2P43308 183 aa20.59■□□□□ 0.89
HOMER3-206ENST00000594439 RAP1GDS1P52306 607 aa20.59■□□□□ 0.89
HOMER3-206ENST00000594439 HNRNPFP52597 415 aaKnown RBP20.59■□□□□ 0.89
HOMER3-206ENST00000594439 ARFIP1P53367 373 aa20.59■□□□□ 0.89
HOMER3-206ENST00000594439 CUL3Q13618 768 aa20.59■□□□□ 0.89
HOMER3-206ENST00000594439 SFT2D3Q587I9 215 aa20.59■□□□□ 0.89
HOMER3-206ENST00000594439 C10orf62Q5T681 223 aaPredicted RBP20.59■□□□□ 0.89
HOMER3-206ENST00000594439 SRRM1Q8IYB3 904 aaKnown RBP20.59■□□□□ 0.89
HOMER3-206ENST00000594439 CSF3RQ99062 836 aa20.59■□□□□ 0.89
HOMER3-206ENST00000594439 CENPKQ9BS16 269 aa20.59■□□□□ 0.89
HOMER3-206ENST00000594439 ZNF717Q9BY31 904 aaPredicted RBP20.59■□□□□ 0.89
HOMER3-206ENST00000594439 GSTO2Q9H4Y5 243 aa20.59■□□□□ 0.89
HOMER3-206ENST00000594439 LYRM4Q9HD34 91 aa20.59■□□□□ 0.89
HOMER3-206ENST00000594439 NECTIN3Q9NQS3 549 aa20.59■□□□□ 0.89
HOMER3-206ENST00000594439 PRDM9Q9NQV7 894 aa20.59■□□□□ 0.89
HOMER3-206ENST00000594439 MMACHCQ9Y4U1 282 aa20.59■□□□□ 0.89
HOMER3-206ENST00000594439 CYR61O00622 381 aa20.58■□□□□ 0.89
HOMER3-206ENST00000594439 SUV39H1O43463 412 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms