RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 FBXO43Q4G163 708 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 BRAT1Q6PJG6 821 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 TMEM220Q6QAJ8 160 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 ARMCX6Q7L4S7 300 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 COMMD6Q7Z4G1 85 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 CYP4Z2PQ8N1L4 340 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 WDR48Q8TAF3 677 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 BTN2A2Q8WVV5 523 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 NUAK2Q9H093 628 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 OR51B5Q9H339 312 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 IMPAD1Q9NX62 359 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 ATP6V1HQ9UI12 483 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 PRRC2BQ5JSZ5 2229 aaKnown RBP15.79■□□□□ 0.12
LIG1-206ENST00000594067 ZW10O43264 779 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 ATG13O75143 517 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 TIMP2P16035 220 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 GABRB1P18505 474 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 MEF2AQ02078 507 aaPredicted RBP15.79■□□□□ 0.12
LIG1-206ENST00000594067 ZNF763Q0D2J5 394 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 C2orf80Q0P641 193 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 SLBPQ14493 270 aaKnown RBP eCLIP15.79■□□□□ 0.12
LIG1-206ENST00000594067 MPEG1Q2M385 716 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 ZNF284Q2VY69 593 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 CCDC190Q86UF4 302 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 RNF130Q86XS8 419 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 OR52N2Q8NGI0 321 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 OR6F1Q8NGZ6 308 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 COL21A1Q96P44 957 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 ROGDIQ9GZN7 287 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 MS4A12Q9NXJ0 267 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 MAPRE3Q9UPY8 281 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 N6AMT1Q9Y5N5 214 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 PRAMEF33A0A0G2JMD5 474 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 PRAMEF10O60809 474 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 DGKEP52429 567 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 DEFA1P59665 94 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 DEFA3P59666 94 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 DCDC1P59894 354 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 TBPL1P62380 186 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 TMEM115Q12893 351 aaPredicted RBP15.79■□□□□ 0.12
LIG1-206ENST00000594067 C10orf62Q5T681 223 aaPredicted RBP15.79■□□□□ 0.12
LIG1-206ENST00000594067 UTS2BQ765I0 119 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 DDX53Q86TM3 631 aaKnown RBP15.79■□□□□ 0.12
LIG1-206ENST00000594067 ZNF480Q8WV37 535 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 C17orf50Q8WW18 174 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 TIFAQ96CG3 184 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 ZSCAN5AQ9BUG6 496 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 C1GALT1Q9NS00 363 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 RHCGQ9UBD6 479 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 KLK4Q9Y5K2 254 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 AP1M2Q9Y6Q5 423 aa15.79■□□□□ 0.12
LIG1-206ENST00000594067 ANKRD34BA5PLL1 514 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 KRT8P05787 483 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 CHI3L1P36222 383 aaPredicted RBP15.78■□□□□ 0.12
LIG1-206ENST00000594067 CDK6Q00534 326 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 STARD3Q14849 445 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 PRSS53Q2L4Q9 553 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 TMEM215Q68D42 235 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 FAM180BQ6P0A1 224 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 ADIPOR2Q86V24 386 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 DEPDC4Q8N2C3 294 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 GLYATL1Q969I3 302 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 PPCDCQ96CD2 204 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 FOPNLQ96NB1 174 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 FAM129BQ96TA1 746 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 ZNF556Q9HAH1 456 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 LAMA3Q16787 3333 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 PNMA8CA0A1B0GUJ8 204 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 CTDSP2O14595 271 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 FURINP09958 794 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 XPAP23025 273 aaPredicted RBP15.78■□□□□ 0.12
LIG1-206ENST00000594067 SOAT1P35610 550 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 CCR2P41597 374 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 PIK3CBP42338 1070 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 HTR3AP46098 478 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 IRF3Q14653 427 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 SLC5A12Q1EHB4 618 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 SPANXN2Q5MJ10 180 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 VASH1Q7L8A9 365 aaPredicted RBP15.78■□□□□ 0.12
LIG1-206ENST00000594067 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.78■□□□□ 0.12
LIG1-206ENST00000594067 KLHDC8AQ8IYD2 350 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 B3GNT7Q8NFL0 401 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 LILRB4Q8NHJ6 448 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 GOT1L1Q8NHS2 421 aaPredicted RBP15.78■□□□□ 0.12
LIG1-206ENST00000594067 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.78■□□□□ 0.12
LIG1-206ENST00000594067 NDEL1Q9GZM8 345 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 MARCH7Q9H992 704 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 ACER3Q9NUN7 267 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 C14orf119Q9NWQ9 140 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 RAB23Q9ULC3 237 aa15.78■□□□□ 0.12
LIG1-206ENST00000594067 WASH3PC4AMC7 463 aa15.77■□□□□ 0.12
LIG1-206ENST00000594067 ZNF197O14709 1029 aa15.77■□□□□ 0.12
LIG1-206ENST00000594067 KRT75O95678 551 aa15.77■□□□□ 0.12
LIG1-206ENST00000594067 APOA1P02647 267 aa15.77■□□□□ 0.12
LIG1-206ENST00000594067 CTSLP07711 333 aa15.77■□□□□ 0.12
LIG1-206ENST00000594067 ADRA2AP08913 450 aa15.77■□□□□ 0.12
LIG1-206ENST00000594067 PRLHRP49683 370 aa15.77■□□□□ 0.12
LIG1-206ENST00000594067 TAS2R50P59544 299 aa15.77■□□□□ 0.12
LIG1-206ENST00000594067 FCHO2Q0JRZ9 810 aa15.77■□□□□ 0.12
LIG1-206ENST00000594067 DENND6BQ8NEG7 585 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms