RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 FAM159BA6NKW6 160 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 NCF1CA8MVU1 366 aaPredicted RBP12.4□□□□□ -0.42
APOC1-209ENST00000592885 NPIPA5E9PKD4 350 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 ASNA1O43681 348 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 STK16O75716 305 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 CCDC166P0CW27 439 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 ESRRAP11474 423 aaPredicted RBP12.4□□□□□ -0.42
APOC1-209ENST00000592885 NCF1P14598 390 aaPredicted RBP12.4□□□□□ -0.42
APOC1-209ENST00000592885 CD1DP15813 335 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 GDF5P43026 501 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 MTTPP55157 894 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 SRSF11Q05519 484 aaKnown RBP12.4□□□□□ -0.42
APOC1-209ENST00000592885 MAPKAPK3Q16644 382 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 PDK4Q16654 411 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 PAGE2BQ5JRK9 111 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 ZNF468Q5VIY5 522 aaPredicted RBP12.4□□□□□ -0.42
APOC1-209ENST00000592885 LRRC70Q7Z2Q7 622 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.4□□□□□ -0.42
APOC1-209ENST00000592885 GPALPP1Q8IXQ4 340 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 C7orf57Q8NEG2 295 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 CCT6BQ92526 530 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 QRFPRQ96P65 431 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 SERINC2Q96SA4 455 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 CCDC77Q9BR77 488 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 ROGDIQ9GZN7 287 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 REXO4Q9GZR2 422 aaKnown RBP12.4□□□□□ -0.42
APOC1-209ENST00000592885 COPS7BQ9H9Q2 264 aaPredicted RBP12.4□□□□□ -0.42
APOC1-209ENST00000592885 SAYSD1Q9NPB0 183 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 ADAP2Q9NPF8 381 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 PRTFDC1Q9NRG1 225 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 SH3BGRL2Q9UJC5 107 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 TINAGQ9UJW2 476 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 NPIPA1Q9UND3 350 aa12.4□□□□□ -0.42
APOC1-209ENST00000592885 MTO1Q9Y2Z2 717 aaKnown RBP12.4□□□□□ -0.42
APOC1-209ENST00000592885 CRYBG3Q68DQ2 2970 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 TCRBV9S1A1TA0A576 114 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 KLRC4-KLRK1H3BQV0 150 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 TAPBPO15533 448 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 MYO1DO94832 1006 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 S100BP04271 92 aaPredicted RBP12.39□□□□□ -0.43
APOC1-209ENST00000592885 ABOP16442 354 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 HTR1EP28566 365 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 SERPINB1P30740 379 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 SSTR1P30872 391 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 ADORA2A-AS1P86434 159 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 CAV1Q03135 178 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 SLC13A2Q13183 592 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 NAB1Q13506 487 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 RUNX2Q13950 521 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 E2F2Q14209 437 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 EFTUD2Q15029 972 aaKnown RBP eCLIP12.39□□□□□ -0.431e-8■■□□□ 12.9
APOC1-209ENST00000592885 ELAVL1Q15717 326 aaKnown RBP12.39□□□□□ -0.43
APOC1-209ENST00000592885 TBCCQ15814 346 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 C18orf21Q32NC0 220 aaPredicted RBP12.39□□□□□ -0.43
APOC1-209ENST00000592885 CAPN12Q6ZSI9 719 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 ZNF227Q86WZ6 799 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 SRFBP1Q8NEF9 429 aaKnown RBP12.39□□□□□ -0.43
APOC1-209ENST00000592885 UBE2E3Q969T4 207 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 KIAA1191Q96A73 305 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 UBXN10Q96LJ8 280 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 UNKQ9C0B0 810 aaKnown RBP12.39□□□□□ -0.43
APOC1-209ENST00000592885 CAB39LQ9H9S4 337 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 DAPP1Q9UN19 280 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 MEMO1Q9Y316 297 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 CLDN16Q9Y5I7 305 aa12.39□□□□□ -0.43
APOC1-209ENST00000592885 A8MUA0 341 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 CXorf49A8MYA2 514 aaPredicted RBP12.38□□□□□ -0.43
APOC1-209ENST00000592885 PRRG2O14669 202 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 PHGDHO43175 533 aaKnown RBP12.38□□□□□ -0.43
APOC1-209ENST00000592885 ITGA10O75578 1167 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 TBX6O95947 436 aaPredicted RBP12.38□□□□□ -0.43
APOC1-209ENST00000592885 STX2P32856 288 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 SPRP35270 261 aaPredicted RBP12.38□□□□□ -0.43
APOC1-209ENST00000592885 KCNC1P48547 511 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 HSPA7P48741 367 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 MEOX1P50221 254 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 GPR143P51810 404 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 RAB10P61026 200 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 HIST2H2ACQ16777 129 aaPredicted RBP12.38□□□□□ -0.43
APOC1-209ENST00000592885 XKR6Q5GH73 641 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 GRTP1Q5TC63 336 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 HIST2H2AA3Q6FI13 130 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 ABHD17CQ6PCB6 329 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 GDF7Q7Z4P5 450 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 VN1R5Q7Z5H4 357 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 CCDC91Q7Z6B0 441 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 MCEMP1Q8IX19 187 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 CYP4Z2PQ8N1L4 340 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 TMEM132CQ8N3T6 1108 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 TMEM156Q8N614 296 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 CPSF7Q8N684 471 aaKnown RBP12.38□□□□□ -0.43
APOC1-209ENST00000592885 SNX31Q8N9S9 440 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 FAM47BQ8NA70 645 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 SPATA4Q8NEY3 305 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 DAZLQ92904 295 aaKnown RBP12.38□□□□□ -0.43
APOC1-209ENST00000592885 NCLNQ969V3 563 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 KCNC2Q96PR1 638 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 TSPAN10Q9H1Z9 355 aaPredicted RBP12.38□□□□□ -0.43
APOC1-209ENST00000592885 DPH5Q9H2P9 285 aa12.38□□□□□ -0.43
APOC1-209ENST00000592885 LYRM4Q9HD34 91 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms