RNA–Protein interactions for RNA: ENST00000592546.5

RFX2-222, Transcript of regulatory factor X2, human

APPRIS ALT1 TSL 2 BASIC

Gene RFX2, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-222	ENST00000592546	HMGA1	P17096	107 aa	Known RBP	13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	TNFRSF1B	P20333	461 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	CDH12	P55289	794 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	EXOC3L2	Q2M3D2	409 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	CLECL1	Q8IZS7	167 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	OR9Q2	Q8NGE9	314 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	CREB3L4	Q8TEY5	395 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	SLC25A46	Q96AG3	418 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	DIRAS2	Q96HU8	199 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	APOLD1	Q96LR9	279 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	ELAC1	Q9H777	363 aa	Known RBP	13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	TPT1P8	Q9HAU6	139 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	STUB1	Q9UNE7	303 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	ALG5	Q9Y673	324 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	AP1M2	Q9Y6Q5	423 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546		A8MVJ9	347 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546		H7C4K7	107 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	AGRP	O00253	132 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	CPSF4	O95639	269 aa	Known RBP	13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	LGI1	O95970	557 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	PSKH1	P11801	424 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	PRPS1L1	P21108	318 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	CSTF2	P33240	577 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	SELENOW	P63302	87 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	SPIB	Q01892	262 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	CACNG1	Q06432	222 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	TMC8	Q8IU68	726 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	SLC44A2	Q8IWA5	706 aa	Predicted RBP	13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	SLC43A3	Q8NBI5	491 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	MAL2	Q969L2	176 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	SH3BP4	Q9P0V3	963 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	HSPB11	Q9Y547	144 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546	PCDHB11	Q9Y5F2	797 aa		13.85	□□□□□ -0.19
RFX2-222	ENST00000592546		A0A1W2PQL4	384 aa	Predicted RBP	13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	OR5K3	A6NET4	321 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	CS	O75390	466 aa	Known RBP	13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	PDE9A	O76083	593 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	HLA-E	P13747	358 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	PCSK2	P16519	638 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	DGKA	P23743	735 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	SRSF11	Q05519	484 aa	Known RBP	13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	TWF1	Q12792	350 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	ADGRF1	Q5T601	910 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	FAAH2	Q6GMR7	532 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	SDE2	Q6IQ49	451 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	NOXRED1	Q6NXP6	359 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	PTCHD4	Q6ZW05	846 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	TRIM69	Q86WT6	500 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	BBS7	Q8IWZ6	715 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	FBXL6	Q8N531	539 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	SPATA9	Q9BWV2	254 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	ELOVL6	Q9H5J4	265 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	CLN6	Q9NWW5	311 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	CLEC2D	Q9UHP7	191 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	NUP50	Q9UKX7	468 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	FZD4	Q9ULV1	537 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	PCDHB9	Q9Y5E1	797 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546		A0A1B0GVM2	712 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	WWP2	O00308	870 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	YY2	O15391	372 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	MPZL2	O60487	215 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	CDRT1	O95170	752 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	TSPAN19	P0C672	248 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	CKMT1A	P12532	417 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	AMD1	P17707	334 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	MXD1	Q05195	221 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	HSPA14	Q0VDF9	509 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	SPHAR	Q15513	63 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	KIAA1143	Q96AT1	154 aa	Predicted RBP	13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	OMA1	Q96E52	524 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	ZC3HAV1L	Q96H79	300 aa	Known RBP	13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	BOC	Q9BWV1	1114 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	ADGRE3	Q9BY15	652 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	FAM120C	Q9NX05	1096 aa	Known RBP	13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	NDUFB11	Q9NX14	153 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	ING3	Q9NXR8	418 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	EIF3K	Q9UBQ5	218 aa	Known RBP	13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	SLC23A1	Q9UHI7	598 aa		13.84	□□□□□ -0.19
RFX2-222	ENST00000592546	KCNE1B	A0A087WTH5	132 aa		13.83	□□□□□ -0.19
RFX2-222	ENST00000592546	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.83	□□□□□ -0.19
RFX2-222	ENST00000592546	ZAR1L	A6NP61	321 aa		13.83	□□□□□ -0.19
RFX2-222	ENST00000592546	NPIPB8	E9PQR5	432 aa		13.83	□□□□□ -0.19
RFX2-222	ENST00000592546	TPST2	O60704	377 aa		13.83	□□□□□ -0.19
RFX2-222	ENST00000592546	ALPI	P09923	528 aa		13.83	□□□□□ -0.19
RFX2-222	ENST00000592546	POU2F1	P14859	743 aa		13.83	□□□□□ -0.19
RFX2-222	ENST00000592546	ACPP	P15309	386 aa		13.83	□□□□□ -0.19
RFX2-222	ENST00000592546	POU3F3	P20264	500 aa	Predicted RBP	13.83	□□□□□ -0.19
RFX2-222	ENST00000592546	MAP2K3	P46734	347 aa		13.83	□□□□□ -0.19
RFX2-222	ENST00000592546	PRMT2	P55345	433 aa		13.83	□□□□□ -0.19
RFX2-222	ENST00000592546	ZXDB	P98169	803 aa		13.83	□□□□□ -0.19
RFX2-222	ENST00000592546	BOP1	Q14137	746 aa	Known RBP	13.83	□□□□□ -0.19
RFX2-222	ENST00000592546	ARHGEF7	Q14155	803 aa		13.83	□□□□□ -0.19
RFX2-222	ENST00000592546	PYDC2	Q56P42	97 aa		13.83	□□□□□ -0.19
RFX2-222	ENST00000592546	LCN1P1	Q5VSP4	162 aa		13.83	□□□□□ -0.19
RFX2-222	ENST00000592546	FAM205BP	Q63HN1	556 aa		13.83	□□□□□ -0.19
RFX2-222	ENST00000592546	DDX53	Q86TM3	631 aa	Known RBP	13.83	□□□□□ -0.19
RFX2-222	ENST00000592546	GLCCI1	Q86VQ1	547 aa		13.83	□□□□□ -0.19
RFX2-222	ENST00000592546	CRIPAK	Q8N1N5	446 aa		13.83	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms