RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 FAM124AQ86V42 546 aa15.03■□□□□ -0
MBD1-227ENST00000592060 SETD9Q8NE22 299 aa15.03■□□□□ -0
MBD1-227ENST00000592060 CNIH3Q8TBE1 160 aa15.03■□□□□ -0
MBD1-227ENST00000592060 MRPL38Q96DV4 380 aaKnown RBP15.03■□□□□ -0
MBD1-227ENST00000592060 CAMK1GQ96NX5 476 aa15.03■□□□□ -0
MBD1-227ENST00000592060 PRAP1Q96NZ9 151 aa15.03■□□□□ -0
MBD1-227ENST00000592060 FERD3LQ96RJ6 166 aa15.03■□□□□ -0
MBD1-227ENST00000592060 TRMT61BQ9BVS5 477 aaKnown RBP15.03■□□□□ -0
MBD1-227ENST00000592060 NAA50Q9GZZ1 169 aaKnown RBP15.03■□□□□ -0
MBD1-227ENST00000592060 BTBD1Q9H0C5 482 aa15.03■□□□□ -0
MBD1-227ENST00000592060 SLAMF7Q9NQ25 335 aa15.03■□□□□ -0
MBD1-227ENST00000592060 NDUFAF4Q9P032 175 aa15.03■□□□□ -0
MBD1-227ENST00000592060 TMEM9Q9P0T7 183 aa15.03■□□□□ -0
MBD1-227ENST00000592060 SLC17A4Q9Y2C5 497 aa15.03■□□□□ -0
MBD1-227ENST00000592060 MAP4K5Q9Y4K4 846 aa15.03■□□□□ -0
MBD1-227ENST00000592060 HSPE1-MOB4S4R3N1 261 aa15.03■□□□□ -0
MBD1-227ENST00000592060 C5orf42Q9H799 3197 aa15.03■□□□□ -0
MBD1-227ENST00000592060 IGKV1-8A0A0C4DH67 115 aa15.02■□□□□ -0
MBD1-227ENST00000592060 NDUFS4O43181 175 aa15.02■□□□□ -0
MBD1-227ENST00000592060 LATO43561 262 aa15.02■□□□□ -0
MBD1-227ENST00000592060 ATE1O95260 518 aa15.02■□□□□ -0
MBD1-227ENST00000592060 CYP4B1P13584 511 aa15.02■□□□□ -0
MBD1-227ENST00000592060 UQCRC2P22695 453 aa15.02■□□□□ -0
MBD1-227ENST00000592060 PKLRP30613 574 aa15.02■□□□□ -0
MBD1-227ENST00000592060 RXRGP48443 463 aa15.02■□□□□ -0
MBD1-227ENST00000592060 PCBP3P57721 371 aaKnown RBP15.02■□□□□ -0
MBD1-227ENST00000592060 CDK6Q00534 326 aa15.02■□□□□ -0
MBD1-227ENST00000592060 ZNF630Q2M218 657 aaPredicted RBP15.02■□□□□ -0
MBD1-227ENST00000592060 DHRS4L2Q6PKH6 230 aa15.02■□□□□ -0
MBD1-227ENST00000592060 UBE3DQ7Z6J8 389 aa15.02■□□□□ -0
MBD1-227ENST00000592060 PITX2Q99697 317 aa15.02■□□□□ -0
MBD1-227ENST00000592060 MKRN2Q9H000 416 aaKnown RBP15.02■□□□□ -0
MBD1-227ENST00000592060 OSGEPL1Q9H4B0 414 aa15.02■□□□□ -0
MBD1-227ENST00000592060 RMI1Q9H9A7 625 aa15.02■□□□□ -0
MBD1-227ENST00000592060 FBXL12Q9NXK8 326 aa15.02■□□□□ -0
MBD1-227ENST00000592060 NDRG4Q9ULP0 352 aaKnown RBP15.02■□□□□ -0
MBD1-227ENST00000592060 KCNK6Q9Y257 313 aa15.02■□□□□ -0
MBD1-227ENST00000592060 PLEKHM1Q9Y4G2 1056 aa15.02■□□□□ -0
MBD1-227ENST00000592060 A0A1W2PQU0 124 aa15.02□□□□□ -0.01
MBD1-227ENST00000592060 PRAMEF25A6NGN4 478 aa15.02□□□□□ -0.01
MBD1-227ENST00000592060 M0QX08 132 aa15.02□□□□□ -0.01
MBD1-227ENST00000592060 CDK4P11802 303 aa15.02□□□□□ -0.01
MBD1-227ENST00000592060 MATN1P21941 496 aa15.02□□□□□ -0.01
MBD1-227ENST00000592060 RRM2P31350 389 aa15.02□□□□□ -0.01
MBD1-227ENST00000592060 MAGEA10P43363 369 aaPredicted RBP15.02□□□□□ -0.01
MBD1-227ENST00000592060 IL5RAQ01344 420 aa15.02□□□□□ -0.01
MBD1-227ENST00000592060 TUBA3CQ13748 450 aa15.02□□□□□ -0.01
MBD1-227ENST00000592060 SIM2Q14190 667 aaPredicted RBP15.02□□□□□ -0.01
MBD1-227ENST00000592060 IFI44LQ53G44 452 aa15.02□□□□□ -0.01
MBD1-227ENST00000592060 CRB2Q5IJ48 1285 aa15.02□□□□□ -0.01
MBD1-227ENST00000592060 PRPF38BQ5VTL8 546 aaKnown RBP15.02□□□□□ -0.01
MBD1-227ENST00000592060 LAIR1Q6GTX8 287 aa15.02□□□□□ -0.01
MBD1-227ENST00000592060 PAGE2Q7Z2X7 111 aa15.02□□□□□ -0.01
MBD1-227ENST00000592060 TTC29Q8NA56 475 aaPredicted RBP15.02□□□□□ -0.01
MBD1-227ENST00000592060 SPPL2AQ8TCT8 520 aa15.02□□□□□ -0.01
MBD1-227ENST00000592060 ZNF764Q96H86 408 aaPredicted RBP15.02□□□□□ -0.01
MBD1-227ENST00000592060 GABRG3Q99928 467 aa15.02□□□□□ -0.01
MBD1-227ENST00000592060 MYOCQ99972 504 aa15.02□□□□□ -0.01
MBD1-227ENST00000592060 LHPPQ9H008 270 aa15.02□□□□□ -0.01
MBD1-227ENST00000592060 SLC6A17Q9H1V8 727 aa15.02□□□□□ -0.01
MBD1-227ENST00000592060 THSD1Q9NS62 852 aa15.02□□□□□ -0.01
MBD1-227ENST00000592060 KRT84Q9NSB2 600 aa15.02□□□□□ -0.01
MBD1-227ENST00000592060 KIF17Q9P2E2 1029 aa15.02□□□□□ -0.01
MBD1-227ENST00000592060 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.02□□□□□ -0.01
MBD1-227ENST00000592060 PCDHGB3Q9Y5G1 929 aa15.02□□□□□ -0.01
MBD1-227ENST00000592060 LYVE1Q9Y5Y7 322 aa15.02□□□□□ -0.01
MBD1-227ENST00000592060 ATG2BQ96BY7 2078 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 CDH23Q9H251 3354 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 PRR23AA6NEV1 266 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 TMPRSS11DO60235 418 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 RNGTTO60942 597 aaKnown RBP15.01□□□□□ -0.01
MBD1-227ENST00000592060 TNFRSF1BP20333 461 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 FRKP42685 505 aaPredicted RBP15.01□□□□□ -0.01
MBD1-227ENST00000592060 PRIM2P49643 509 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 RAB28P51157 221 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 PIGFQ07326 219 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 SGCGQ13326 291 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 CLCA4Q14CN2 919 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 TMEM196Q5HYL7 178 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 ATAT1Q5SQI0 421 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 SAXO2Q658L1 398 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 B3GNT8Q7Z7M8 397 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 NUDT13Q86X67 352 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 RAB42Q8N4Z0 105 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 ATG16L2Q8NAA4 619 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 OR4C15Q8NGM1 316 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 OR2A1Q8NGT9 310 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 OR2L8Q8NGY9 312 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 OR5P2Q8WZ92 322 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 MUL1Q969V5 352 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 MAGED4Q96JG8 741 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 QRFPRQ96P65 431 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 GABARAPL3Q9BY60 117 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 SLC17A9Q9BYT1 436 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 AICDAQ9GZX7 198 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 ABCG4Q9H172 646 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 XKR8Q9H6D3 395 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 ADAM29Q9UKF5 820 aa15.01□□□□□ -0.01
MBD1-227ENST00000592060 HEMK1Q9Y5R4 338 aaPredicted RBP15.01□□□□□ -0.01
MBD1-227ENST00000592060 COL4A2P08572 1712 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms