RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 GLRBP48167 497 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 RHAGQ02094 409 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 EEF1A2Q05639 463 aaKnown RBP10.56□□□□□ -0.72
SMAD4-211ENST00000590499 DOC2AQ14183 400 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 NAA30Q147X3 362 aaPredicted RBP10.56□□□□□ -0.72
SMAD4-211ENST00000590499 SETDB1Q15047 1291 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 ADPRMQ3LIE5 342 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 FAM153CQ494X1 144 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 TECRLQ5HYJ1 363 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 SLC6A19Q695T7 634 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 FAAH2Q6GMR7 532 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 ADNP2Q6IQ32 1131 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 NIPAL1Q6NVV3 410 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 IGFL2Q6UWQ7 119 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 ABHD13Q7L211 337 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 KRT78Q8N1N4 520 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 EIF1ADQ8N9N8 165 aaKnown RBP10.56□□□□□ -0.72
SMAD4-211ENST00000590499 SNX31Q8N9S9 440 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 Q8NA96 180 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 UHMK1Q8TAS1 419 aaKnown RBP10.56□□□□□ -0.72
SMAD4-211ENST00000590499 NUDT8Q8WV74 236 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 MS4A6EQ96DS6 147 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 PTCD3Q96EY7 689 aaKnown RBP10.56□□□□□ -0.72
SMAD4-211ENST00000590499 OR1F2PQ96R84 312 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 WDR77Q9BQA1 342 aaPredicted RBP10.56□□□□□ -0.72
SMAD4-211ENST00000590499 EFCAB11Q9BUY7 163 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 LHPPQ9H008 270 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 ZNF700Q9H0M5 742 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 RHBGQ9H310 441 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 CLK4Q9HAZ1 481 aaKnown RBP10.56□□□□□ -0.72
SMAD4-211ENST00000590499 ZNF160Q9HCG1 818 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 ZNF490Q9ULM2 529 aaPredicted RBP10.56□□□□□ -0.72
SMAD4-211ENST00000590499 PTPN13Q12923 2485 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 NSG1A0A0A6YYJ2 146 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 EXOC1LA0A1B0GW35 172 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 LRIT2A6NDA9 550 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 OR2W5A6NFC9 320 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 URADA6NGE7 173 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 POC1B-GALNT4F8VUJ3 575 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 K7EPI3 171 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 CLGNO14967 610 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 CHST10O43529 356 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 H2AFYO75367 372 aaKnown RBP10.55□□□□□ -0.72
SMAD4-211ENST00000590499 CLEC3AO75596 197 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 KRT38O76015 456 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 WISP1O95388 367 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 ALPPP05187 535 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 C8orf89P0DMQ9 161 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 MYBL2P10244 700 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 HNF4AP41235 474 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 MSH2P43246 934 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 RAB8AP61006 207 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 SKP1P63208 163 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 OLR1P78380 273 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 CHIT1Q13231 466 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 SWI5Q1ZZU3 235 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 MINDY4Q4G0A6 757 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 XKR6Q5GH73 641 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 TOR1AIP1Q5JTV8 583 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 JMJD6Q6NYC1 403 aaPredicted RBP10.55□□□□□ -0.72
SMAD4-211ENST00000590499 LANCL3Q6ZV70 420 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 TAOK1Q7L7X3 1001 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 GSPT2Q8IYD1 628 aaKnown RBP10.55□□□□□ -0.72
SMAD4-211ENST00000590499 AMER2Q8N7J2 671 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 PLPP5Q8NEB5 264 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 PSMF1Q92530 271 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 GAL3ST3Q96A11 431 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 PNPLA2Q96AD5 504 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 MIB2Q96AX9 1013 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 TBC1D20Q96BZ9 403 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 PEX11GQ96HA9 241 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 IMMP1LQ96LU5 166 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 RBCK1Q9BYM8 510 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 VPS11Q9H270 941 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 RIC8BQ9NVN3 520 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 OPTCQ9UBM4 332 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 IKBKGQ9Y6K9 419 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 HIVEP3Q5T1R4 2406 aa10.55□□□□□ -0.72
SMAD4-211ENST00000590499 MAGEB17A8MXT2 336 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 TRIM49D1C9J1S8 452 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 PRMT3O60678 531 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 SERPINA7P05543 415 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 FHP07954 510 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 CELA2AP08217 269 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 PRR35P0CG20 571 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 COL6A2P12110 1019 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 ALDH18A1P54886 795 aaKnown RBP10.54□□□□□ -0.72
SMAD4-211ENST00000590499 MLLT10P55197 1068 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 STXBP1P61764 594 aaKnown RBP10.54□□□□□ -0.72
SMAD4-211ENST00000590499 IRF8Q02556 426 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 LAPTM5Q13571 262 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 ELOAQ14241 798 aaKnown RBP10.54□□□□□ -0.72
SMAD4-211ENST00000590499 PCBP2Q15366 365 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMAD4-211ENST00000590499 PAGE2BQ5JRK9 111 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 AGAP7PQ5VUJ5 663 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 KLC3Q6P597 504 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 TIFABQ6ZNK6 161 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 CPEB2Q7Z5Q1 589 aaKnown RBP10.54□□□□□ -0.72
SMAD4-211ENST00000590499 ANKRD37Q7Z713 158 aa10.54□□□□□ -0.72
SMAD4-211ENST00000590499 KBTBD2Q8IY47 623 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms