RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 MLIPQ5VWP3 458 aa12.89□□□□□ -0.35
VMP1-210ENST00000589823 FAM199XQ6PEV8 388 aaPredicted RBP12.89□□□□□ -0.35
VMP1-210ENST00000589823 ZNF793Q6ZN11 406 aa12.89□□□□□ -0.35
VMP1-210ENST00000589823 OVCH1Q7RTY7 1134 aa12.89□□□□□ -0.35
VMP1-210ENST00000589823 DTX1Q86Y01 620 aa12.89□□□□□ -0.35
VMP1-210ENST00000589823 IL22RA1Q8N6P7 574 aa12.89□□□□□ -0.35
VMP1-210ENST00000589823 AMER3Q8N944 861 aa12.89□□□□□ -0.35
VMP1-210ENST00000589823 OR51Q1Q8NH59 317 aa12.89□□□□□ -0.35
VMP1-210ENST00000589823 FKBP10Q96AY3 582 aa12.89□□□□□ -0.35
VMP1-210ENST00000589823 C3orf30Q96M34 536 aa12.89□□□□□ -0.35
VMP1-210ENST00000589823 ZNF717Q9BY31 904 aaPredicted RBP12.89□□□□□ -0.35
VMP1-210ENST00000589823 LYRM4Q9HD34 91 aa12.89□□□□□ -0.35
VMP1-210ENST00000589823 FGFR1OP2Q9NVK5 253 aa12.89□□□□□ -0.35
VMP1-210ENST00000589823 WDR70Q9NW82 654 aa12.89□□□□□ -0.35
VMP1-210ENST00000589823 LYARQ9NX58 379 aaKnown RBP12.89□□□□□ -0.35
VMP1-210ENST00000589823 ZNF282Q9UDV7 671 aaPredicted RBP12.89□□□□□ -0.35
VMP1-210ENST00000589823 MCM8Q9UJA3 840 aa12.89□□□□□ -0.35
VMP1-210ENST00000589823 TMED5Q9Y3A6 229 aa12.89□□□□□ -0.35
VMP1-210ENST00000589823 A0A0A6YYD5 115 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 GNG14A0A1W2PPG7 69 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 DIAPH2O60879 1101 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 GUCY1B2O75343 617 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 TGDSO95455 350 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 ALBP02768 609 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 GBAP04062 536 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 FAM58BPP0C7Q3 252 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 MAPK1P28482 360 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 TPP2P29144 1249 aaPredicted RBP12.88□□□□□ -0.35
VMP1-210ENST00000589823 TIA1P31483 386 aaKnown RBP eCLIP12.88□□□□□ -0.35
VMP1-210ENST00000589823 STAT5AP42229 794 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 MAPK12P53778 367 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 RPL38P63173 70 aaKnown RBP12.88□□□□□ -0.35
VMP1-210ENST00000589823 GNGT1P63211 74 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 MAD2L1Q13257 205 aaPredicted RBP12.88□□□□□ -0.35
VMP1-210ENST00000589823 SYT16Q17RD7 645 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 TUBB8Q3ZCM7 444 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 LCN10Q6JVE6 187 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 ZNF517Q6ZMY9 492 aaPredicted RBP12.88□□□□□ -0.35
VMP1-210ENST00000589823 COX15Q7KZN9 410 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 LRRC34Q8IZ02 419 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 CA13Q8N1Q1 262 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 EFCAB3Q8N7B9 438 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 FNDC5Q8NAU1 212 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 OR5T3Q8NGG3 340 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 ADAMTS18Q8TE60 1221 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 GATA6Q92908 595 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 NKD1Q969G9 470 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 KIAA1143Q96AT1 154 aaPredicted RBP12.88□□□□□ -0.35
VMP1-210ENST00000589823 CHMP6Q96FZ7 201 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 PEX11GQ96HA9 241 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 SIKE1Q9BRV8 207 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 TRIM55Q9BYV6 548 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 AKTIPQ9H8T0 292 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 AKIRIN1Q9H9L7 192 aaPredicted RBP12.88□□□□□ -0.35
VMP1-210ENST00000589823 NPHS2Q9NP85 383 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 MKKSQ9NPJ1 570 aaPredicted RBP12.88□□□□□ -0.35
VMP1-210ENST00000589823 SLC22A11Q9NSA0 550 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 C14orf105Q9NVL8 296 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 SIRT5Q9NXA8 310 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 MS4A12Q9NXJ0 267 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 DKK4Q9UBT3 224 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 PHF11Q9UIL8 331 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 CROTQ9UKG9 612 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 FBXW2Q9UKT8 454 aa12.88□□□□□ -0.35
VMP1-210ENST00000589823 POLR3HQ9Y535 204 aaPredicted RBP12.88□□□□□ -0.35
VMP1-210ENST00000589823 GOLGA8QA0A0J9YX86 632 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 GOLGA8OA6NCC3 632 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 C21orf140B9A014 251 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 GOLGA8NF8WBI6 632 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 SDHDO14521 159 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 TMPRSS11DO60235 418 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 ANXA4P09525 319 aaPredicted RBP12.87□□□□□ -0.35
VMP1-210ENST00000589823 RAB40ALP0C0E4 278 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 ALOX15P16050 662 aaPredicted RBP12.87□□□□□ -0.35
VMP1-210ENST00000589823 LBPP18428 481 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 IL10P22301 178 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 CPN2P22792 545 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 EPHA3P29320 983 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 LSP1P33241 339 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 BUD31P41223 144 aaPredicted RBP12.87□□□□□ -0.35
VMP1-210ENST00000589823 XCR1P46094 333 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 AQP5P55064 265 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 LIM2P55344 173 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 RAB38P57729 211 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 RPS15P62841 145 aaKnown RBP12.87□□□□□ -0.35
VMP1-210ENST00000589823 KIAA0040Q15053 153 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 NCF4Q15080 339 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 SMU1Q2TAY7 513 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 RFTN2Q52LD8 501 aaPredicted RBP12.87□□□□□ -0.35
VMP1-210ENST00000589823 C6orf136Q5SQH8 315 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 VWA5B1Q5TIE3 1220 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 NXNQ6DKJ4 435 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 NOXRED1Q6NXP6 359 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 GALNT18Q6P9A2 607 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 FAM198BQ6UWH4 519 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 ACAD11Q709F0 780 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 MAVSQ7Z434 540 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 GPR180Q86V85 440 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 PARP9Q8IXQ6 854 aa12.87□□□□□ -0.35
VMP1-210ENST00000589823 ZNF248Q8NDW4 579 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms