RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 PCDHGA9Q9Y5G4 932 aaKnown RBP9.81□□□□□ -0.84
SDF2-208ENST00000589788 HS3ST3B1Q9Y662 390 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 TLN1Q9Y490 2541 aaKnown RBP9.81□□□□□ -0.84
SDF2-208ENST00000589788 LOC400499M0QZD8 3231 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 ATMQ13315 3056 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 IQANK1A0A1B0GTG1 560 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 TLDC2A0PJX2 215 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 ZNF860A6NHJ4 632 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 GOLGA6L10A6NI86 522 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 PCDH17O14917 1159 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 SLC28A2O43868 658 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 KLHL41O60662 606 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 GALR3O60755 368 aaPredicted RBP9.8□□□□□ -0.84
SDF2-208ENST00000589788 ALPPP05187 535 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 MYZAPP0CAP1 466 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 MTHFD2P13995 350 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 NR1D1P20393 614 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 HPDP32754 393 aaPredicted RBP9.8□□□□□ -0.84
SDF2-208ENST00000589788 XCR1P46094 333 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 SLCO1A2P46721 670 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 ALDH18A1P54886 795 aaKnown RBP9.8□□□□□ -0.84
SDF2-208ENST00000589788 STXBP1P61764 594 aaKnown RBP9.8□□□□□ -0.84
SDF2-208ENST00000589788 SNRPNP63162 240 aaKnown RBP9.8□□□□□ -0.84
SDF2-208ENST00000589788 RAPSNQ13702 412 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 DOC2AQ14183 400 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 SETDB1Q15047 1291 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 MINDY4Q4G0A6 757 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 TECRLQ5HYJ1 363 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 KIRREL2Q6UWL6 708 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 ZC3H7AQ8IWR0 971 aaKnown RBP9.8□□□□□ -0.84
SDF2-208ENST00000589788 PLD6Q8N2A8 252 aaKnown RBP9.8□□□□□ -0.84
SDF2-208ENST00000589788 GALNT16Q8N428 558 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 TEX9Q8N6V9 391 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 TEX19Q8NA77 164 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 FDCSPQ8NFU4 85 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 OR11G2Q8NGC1 345 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 METTL21AQ8WXB1 218 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 UBE2E3Q969T4 207 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 PGM2Q96G03 612 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 SEC16BQ96JE7 1060 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 FAR2Q96K12 515 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 GPR78Q96P69 363 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 SH3GL2Q99962 352 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 MKL2Q9ULH7 1088 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 TMCO1Q9UM00 188 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 ZNF451Q9Y4E5 1061 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 ASB1Q9Y576 335 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 TNPO3Q9Y5L0 923 aaKnown RBP9.8□□□□□ -0.84
SDF2-208ENST00000589788 PCSK5Q92824 1860 aa9.8□□□□□ -0.84
SDF2-208ENST00000589788 TNRC6AQ8NDV7 1962 aaKnown RBP9.79□□□□□ -0.84
SDF2-208ENST00000589788 SMIM23A6NLE4 172 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 K7EM74 188 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 SMIM24O75264 130 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 ALOX12BO75342 701 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 CLEC3AO75596 197 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 CEACAM4O75871 244 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 RGS9O75916 674 aaPredicted RBP9.79□□□□□ -0.84
SDF2-208ENST00000589788 BMP10O95393 424 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 HPP00738 406 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 IL10P22301 178 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 ITGA3P26006 1051 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 PIK3CGP48736 1102 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 RAB8AP61006 207 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 KLRB1Q12918 225 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 TBCCQ15814 346 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 ATG14Q6ZNE5 492 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 PDSS2Q86YH6 399 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 MYLK4Q86YV6 388 aaPredicted RBP9.79□□□□□ -0.84
SDF2-208ENST00000589788 AFAP1L2Q8N4X5 818 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 OR5T3Q8NGG3 340 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 STK35Q8TDR2 534 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 UTP15Q8TED0 518 aaKnown RBP9.79□□□□□ -0.84
SDF2-208ENST00000589788 CREB3L4Q8TEY5 395 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 GAL3ST3Q96A11 431 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 C8orf44Q96CB5 159 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 WDR34Q96EX3 536 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 PEX11GQ96HA9 241 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 TMBIM4Q9HC24 238 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 COPG2Q9UBF2 871 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 XPR1Q9UBH6 696 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 ANAPC2Q9UJX6 822 aa9.79□□□□□ -0.84
SDF2-208ENST00000589788 A0A088AWK7 358 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 NSG1A0A0A6YYJ2 146 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 LRIT2A6NDA9 550 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 SHISA8B8ZZ34 492 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 MASP2O00187 686 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 PSMD12O00232 456 aaPredicted RBP9.78□□□□□ -0.84
SDF2-208ENST00000589788 RGS16O15492 202 aaPredicted RBP9.78□□□□□ -0.84
SDF2-208ENST00000589788 ERI3O43414 337 aaKnown RBP9.78□□□□□ -0.84
SDF2-208ENST00000589788 SUV39H1O43463 412 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 CHST10O43529 356 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 KLK8O60259 260 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 PRAMEF4O60810 478 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 JRKO75564 520 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 CYC1P08574 325 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 C8orf89P0DMQ9 161 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 PCNAP12004 261 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 EPORP19235 508 aa9.78□□□□□ -0.84
SDF2-208ENST00000589788 ZNF10P21506 573 aaPredicted RBP9.78□□□□□ -0.84
SDF2-208ENST00000589788 JAK1P23458 1154 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms