RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 WDR34Q96EX3 536 aa9.96□□□□□ -0.82
CLPTM1-211ENST00000589347 PTCHD1Q96NR3 888 aa9.96□□□□□ -0.82
CLPTM1-211ENST00000589347 KCNC2Q96PR1 638 aa9.96□□□□□ -0.82
CLPTM1-211ENST00000589347 ATOH8Q96SQ7 321 aa9.96□□□□□ -0.82
CLPTM1-211ENST00000589347 RHBGQ9H310 441 aa9.96□□□□□ -0.82
CLPTM1-211ENST00000589347 TMCO1Q9UM00 188 aa9.96□□□□□ -0.82
CLPTM1-211ENST00000589347 CROCCQ5TZA2 2017 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 A0A087WUV0 522 aaPredicted RBP9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 A0A096LPK6 155 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 SAGE2PA6NJ88 616 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 TCP11X1B4DZS4 312 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 CLDN4O14493 209 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 B4GALT2O60909 372 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 MLYCDO95822 493 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 WDPCPO95876 746 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 CRYABP02511 175 aaKnown RBP9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 C2P06681 752 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 SMIM10L1P0DMW3 83 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 PCNAP12004 261 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 EPB42P16452 691 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 GRNP28799 593 aaKnown RBP9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 HNRNPH1P31943 449 aaKnown RBP9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 MSH2P43246 934 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 EFNA3P52797 238 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 ALDH18A1P54886 795 aaKnown RBP9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 MTTPP55157 894 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 SLC26A5P58743 744 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 SNRPNP63162 240 aaKnown RBP9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 BTN3A2P78410 334 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 HYAL2Q12891 473 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 CHIT1Q13231 466 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 DOC2AQ14183 400 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 SETDB1Q15047 1291 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 TERF2Q15554 542 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 TSNAXIP1Q2TAA8 658 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 FBXO48Q5FWF7 155 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 MED27Q6P2C8 311 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 ISCA2Q86U28 154 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 CNPY4Q8N129 248 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 LGI4Q8N135 537 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 HORMAD2Q8N7B1 307 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 FAM98AQ8NCA5 519 aaKnown RBP9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 PRR7Q8TB68 274 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 KCTD4Q8WVF5 259 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 NXNL1Q96CM4 212 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 REPS1Q96D71 796 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 MS4A6EQ96DS6 147 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 C19orf60Q96EN9 201 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 SMIM10Q96HG1 83 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 C5orf34Q96MH7 638 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 SERINC2Q96SA4 455 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 VPS11Q9H270 941 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 KLHL31Q9H511 634 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 OLAHQ9NV23 265 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 CPSF2Q9P2I0 782 aaKnown RBP9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 ADGRE2Q9UHX3 823 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 TNPO3Q9Y5L0 923 aaKnown RBP9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 GTF3C1Q12789 2109 aa9.95□□□□□ -0.82
CLPTM1-211ENST00000589347 EML6Q6ZMW3 1958 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 TCRBV16S1A1N1A0A5B0 115 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 LRIT2A6NDA9 550 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 A8MUI8 341 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 FCHO1O14526 889 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 PRAMEF2O60811 474 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 SMIM24O75264 130 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 KLHL2O95198 593 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 RASAL1O95294 804 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 B3GALT4O96024 378 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 RBP1P09455 135 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 CERS1P27544 350 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 ARL1P40616 181 aaPredicted RBP9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 CASP2P42575 452 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 RAP1GDS1P52306 607 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 PLA2G16P53816 162 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 PER3P56645 1201 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 HSD17B7P56937 341 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 IRF9Q00978 393 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 DLG1Q12959 904 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 SLC13A2Q13183 592 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 NAA30Q147X3 362 aaPredicted RBP9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 ADPRMQ3LIE5 342 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 TMEM35AQ53FP2 167 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 ACER2Q5QJU3 275 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 GRHL2Q6ISB3 625 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 METTL2BQ6P1Q9 378 aaKnown RBP9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 CHSY3Q70JA7 882 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 MYLK4Q86YV6 388 aaPredicted RBP9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 CRLF3Q8IUI8 442 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 IFT20Q8IY31 132 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 ZNF595Q8IYB9 648 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 CENPLQ8N0S6 344 aaPredicted RBP9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 TMEM178AQ8NBL3 297 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 NOA1Q8NC60 698 aaKnown RBP9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 GRHL3Q8TE85 626 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 FAR1Q8WVX9 515 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 SLC44A1Q8WWI5 657 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 PSMF1Q92530 271 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 ESAMQ96AP7 390 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 PAFAH2Q99487 392 aa9.94□□□□□ -0.82
CLPTM1-211ENST00000589347 CCDC77Q9BR77 488 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms