RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, human

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN2-208	ENST00000589216	B3GNT3	Q9Y2A9	372 aa		9.27	□□□□□ -0.93
PTPN2-208	ENST00000589216	RNF11	Q9Y3C5	154 aa		9.27	□□□□□ -0.93
PTPN2-208	ENST00000589216	MYOCOS	A0A1B0GUC4	107 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216		A0A1W2PPM1	405 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	TCRBV16S1A1N1	A0A5B0	115 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	URAD	A6NGE7	173 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	TTLL8	A6PVC2	850 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	PLPP1	O14494	284 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	PCDH17	O14917	1159 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	ZNF500	O60304	480 aa	Predicted RBP	9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	TGFB1	P01137	390 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	RBP1	P09455	135 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	COL6A2	P12110	1019 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	JAK1	P23458	1154 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	RAB38	P57729	211 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	SKP1	P63208	163 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	MFAP5	Q13361	173 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	LAPTM5	Q13571	262 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	INPP5J	Q15735	1006 aa	Predicted RBP	9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	BTBD16	Q32M84	506 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	CRB2	Q5IJ48	1285 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	IRAK1BP1	Q5VVH5	260 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	PLAG1	Q6DJT9	500 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	ISLR2	Q6UXK2	745 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	TIFAB	Q6ZNK6	161 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	CLNK	Q7Z7G1	428 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	SCUBE1	Q8IWY4	988 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	KIF2B	Q8N4N8	673 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	EIF1AD	Q8N9N8	165 aa	Known RBP	9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	PLPP5	Q8NEB5	264 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	CATSPER1	Q8NEC5	780 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	OR2W6P	Q8NHA6	318 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	HUS1B	Q8NHY5	278 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	WDR20	Q8TBZ3	569 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	CPT1C	Q8TCG5	803 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	PPP4R1	Q8TF05	950 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	ZNF483	Q8TF39	744 aa	Predicted RBP	9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	UBLCP1	Q8WVY7	318 aa	Predicted RBP	9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	SEC16B	Q96JE7	1060 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	VPS50	Q96JG6	964 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	CNDP1	Q96KN2	507 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	MAGEB10	Q96LZ2	347 aa	Predicted RBP	9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	TMEM237	Q96Q45	408 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	MRPL57	Q9BQC6	102 aa	Known RBP	9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	NOL11	Q9H8H0	719 aa	Known RBP	9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	SEMA4B	Q9NPR2	832 aa	Predicted RBP	9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	PRDM7	Q9NQW5	492 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	PLA2G3	Q9NZ20	509 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	C19orf25	Q9UFG5	118 aa	Predicted RBP	9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	FETUB	Q9UGM5	382 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	ANGPTL3	Q9Y5C1	460 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	PCDHGA10	Q9Y5H3	936 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216	COL12A1	Q99715	3063 aa		9.26	□□□□□ -0.93
PTPN2-208	ENST00000589216		A8MUA0	341 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	STX16-NPEPL1	H3BU86	382 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	PSMD12	O00232	456 aa	Predicted RBP	9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	CYR61	O00622	381 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	STX16	O14662	325 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	B3GALT2	O43825	422 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	PRMT3	O60678	531 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	PRKRA	O75569	313 aa	Known RBP	9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	SCEL	O95171	688 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	PYGB	P11216	843 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	IL10	P22301	178 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	ATP5A1	P25705	553 aa	Known RBP	9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	HSD17B3	P37058	310 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	SSR2	P43308	183 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	NEK2	P51955	445 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	MTTP	P55157	894 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	LIM2	P55344	173 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	OR4D2	P58180	307 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	SLC26A5	P58743	744 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	RPS13	P62277	151 aa	Known RBP	9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	ZRSR2	Q15696	482 aa	Known RBP	9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	CPSF6	Q16630	551 aa	Known RBP eCLIP	9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	TCHHL1	Q5QJ38	904 aa	Predicted RBP	9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	LCE2D	Q5TA82	110 aa	Predicted RBP	9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	KHDRBS2	Q5VWX1	349 aa	Known RBP	9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	NIPAL1	Q6NVV3	410 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	LETMD1	Q6P1Q0	360 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	RIPOR1	Q6ZS17	1223 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	SH2D5	Q6ZV89	423 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	HPS6	Q86YV9	775 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	CRLF3	Q8IUI8	442 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	BEST3	Q8N1M1	668 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	ZADH2	Q8N4Q0	377 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	ACOT4	Q8N9L9	421 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	L3MBTL4	Q8NA19	623 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	TM9SF4	Q92544	642 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	MTBP	Q96DY7	904 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	FAR2	Q96K12	515 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	PTCHD1	Q96NR3	888 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	KCNC2	Q96PR1	638 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	SERINC2	Q96SA4	455 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	MAPKAP1	Q9BPZ7	522 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	ILKAP	Q9H0C8	392 aa	Predicted RBP	9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	C12orf65	Q9H3J6	166 aa	Known RBP	9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	EPS8L2	Q9H6S3	715 aa		9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	COPS7B	Q9H9Q2	264 aa	Predicted RBP	9.25	□□□□□ -0.93
PTPN2-208	ENST00000589216	SLAMF7	Q9NQ25	335 aa		9.25	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms