RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 HTR3BO95264 441 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 NFATC1O95644 943 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 SEMG1P04279 462 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 AGXTP21549 392 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 KELP23276 732 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 PDHA2P29803 388 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 RANBP1P43487 201 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 VLDLRP98155 873 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 CTBSQ01459 385 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 EMX1Q04741 257 aaPredicted RBP7.09□□□□□ -1.27
ZNF540-206ENST00000589117 C2orf80Q0P641 193 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 RPA4Q13156 261 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 SLC14A1Q13336 389 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 SLBPQ14493 270 aaKnown RBP eCLIP7.09□□□□□ -1.27
ZNF540-206ENST00000589117 DGUOKQ16854 277 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 ZNF630Q2M218 657 aaPredicted RBP7.09□□□□□ -1.27
ZNF540-206ENST00000589117 POM121L1PQ3SYA9 428 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 IFI44LQ53G44 452 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 GCNT6Q5T4J0 391 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 FAHD1Q6P587 224 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 PARS2Q7L3T8 475 aaKnown RBP7.09□□□□□ -1.27
ZNF540-206ENST00000589117 PRSS48Q7RTY5 328 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 PAGE2Q7Z2X7 111 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 COMMD6Q7Z4G1 85 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 VTCN1Q7Z7D3 282 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 RAB42Q8N4Z0 105 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 OR52N2Q8NGI0 321 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 CNIH3Q8TBE1 160 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 GIPC3Q8TF64 312 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 POF1BQ8WVV4 589 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 MYDGFQ969H8 173 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 ABTB1Q969K4 478 aaPredicted RBP7.09□□□□□ -1.27
ZNF540-206ENST00000589117 PLEKHA8Q96JA3 519 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 CLUHP3Q96NS8 147 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 QRFPRQ96P65 431 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 DPH2Q9BQC3 489 aaPredicted RBP7.09□□□□□ -1.27
ZNF540-206ENST00000589117 SLC35A5Q9BS91 424 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 WDR12Q9GZL7 423 aaKnown RBP7.09□□□□□ -1.27
ZNF540-206ENST00000589117 PCBD2Q9H0N5 130 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 TMEM38AQ9H6F2 299 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 MYNNQ9NPC7 610 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 TAS2R9Q9NYW1 312 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 DEC1Q9P2X7 70 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 ENPP5Q9UJA9 477 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 B3GNT3Q9Y2A9 372 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 PIPSLA2A3N6 862 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 TRIM43BA6NCK2 446 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 ANKDD1BA6NHY2 528 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 A8MVJ9 347 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 POP7O75817 140 aaKnown RBP7.09□□□□□ -1.28
ZNF540-206ENST00000589117 CISD3P0C7P0 127 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 CYP4B1P13584 511 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 SERPINB1P30740 379 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 GRK3P35626 688 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 RPP38P78345 283 aaKnown RBP7.09□□□□□ -1.28
ZNF540-206ENST00000589117 SLC35A2P78381 396 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 RAE1P78406 368 aaKnown RBP7.09□□□□□ -1.28
ZNF540-206ENST00000589117 GPLD1P80108 840 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 ZNF846Q147U1 533 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 ARHGAP19Q14CB8 494 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 LRRC26Q2I0M4 334 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 HNRNPA1L2Q32P51 320 aaKnown RBP7.09□□□□□ -1.28
ZNF540-206ENST00000589117 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.09□□□□□ -1.28
ZNF540-206ENST00000589117 TMIGD1Q6UXZ0 262 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 CEP68Q76N32 757 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 ZNF551Q7Z340 670 aaPredicted RBP7.09□□□□□ -1.28
ZNF540-206ENST00000589117 GRASPQ7Z6J2 395 aaPredicted RBP7.09□□□□□ -1.28
ZNF540-206ENST00000589117 CHPFQ8IZ52 775 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 NAGSQ8N159 534 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 SMYD1Q8NB12 490 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 OR2L2Q8NH16 312 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 RAB7BQ96AH8 199 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 TRIM43Q96BQ3 446 aaPredicted RBP7.09□□□□□ -1.28
ZNF540-206ENST00000589117 PAWRQ96IZ0 340 aaKnown RBP7.09□□□□□ -1.28
ZNF540-206ENST00000589117 COX4I2Q96KJ9 171 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 HRASLS5Q96KN8 279 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 C7orf34Q96L11 122 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 NLNQ9BYT8 704 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 NAA50Q9GZZ1 169 aaKnown RBP7.09□□□□□ -1.28
ZNF540-206ENST00000589117 DMRT3Q9NQL9 472 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 GULP1Q9UBP9 304 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 ANGPT4Q9Y264 503 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 ASF1AQ9Y294 204 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 POFUT2Q9Y2G5 429 aa7.09□□□□□ -1.28
ZNF540-206ENST00000589117 HEMK1Q9Y5R4 338 aaPredicted RBP7.09□□□□□ -1.28
ZNF540-206ENST00000589117 LTBP2Q14767 1821 aa7.08□□□□□ -1.28
ZNF540-206ENST00000589117 PLXNB3Q9ULL4 1909 aa7.08□□□□□ -1.28
ZNF540-206ENST00000589117 A0A1W2PRB8 838 aa7.08□□□□□ -1.28
ZNF540-206ENST00000589117 KRT87PA6NCN2 255 aa7.08□□□□□ -1.28
ZNF540-206ENST00000589117 TMEM247A6NEH6 219 aa7.08□□□□□ -1.28
ZNF540-206ENST00000589117 CLDN25C9JDP6 229 aa7.08□□□□□ -1.28
ZNF540-206ENST00000589117 C1QTNF3-AMACRE9PGA6 284 aa7.08□□□□□ -1.28
ZNF540-206ENST00000589117 NRG2O14511 850 aaPredicted RBP7.08□□□□□ -1.28
ZNF540-206ENST00000589117 XPNPEP2O43895 674 aa7.08□□□□□ -1.28
ZNF540-206ENST00000589117 SH3BP5O60239 455 aa7.08□□□□□ -1.28
ZNF540-206ENST00000589117 MITFO75030 526 aaPredicted RBP7.08□□□□□ -1.28
ZNF540-206ENST00000589117 BCAS1O75363 584 aaPredicted RBP7.08□□□□□ -1.28
ZNF540-206ENST00000589117 SH3BGRLO75368 114 aa7.08□□□□□ -1.28
ZNF540-206ENST00000589117 TGFB1P01137 390 aa7.08□□□□□ -1.28
ZNF540-206ENST00000589117 CYP17A1P05093 508 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms